Evidence map›Paper›PMID 18167027›Full record

ArticleCurrent microbiology2008

Urease activity and urea gene sequencing of coccoid forms of H. pylori induced by different factors.

Fusun Can, Ceren Karahan, Istar Dolapci, Muge Demirbilek, Alper Tekeli, Hande Arslan

Abstract read
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Article in Current microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Trial
  2. Coccoid Helicobacter pylori in patients with obesity: an immunohistochemical study.Virchows Archiv : an international journal of pathology · 2025
    Article
  3. Article
  4. Helicobacter pylori: an up-to-date overview on the virulence and pathogenesis mechanisms.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  5. World journal of gastroenterology · 2021
    Article
  6. Article
  7. Cells · 2020
    Review
  8. Article
  9. The Puzzle of Coccoid Forms ofAntibiotics (Basel, Switzerland) · 2020
    Review
  10. Occurrence of cagAScientific reports · 2018
    Article
  11. Article
  12. Significance of dormant forms ofWorld journal of gastroenterology · 2017
    Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Fusun CanDepartment of Microbiology and Clinical Microbiology, Baskent University School of Medicine, Ankara, Turkey. fcan@baskent.edu.tr
Ceren Karahan
Istar Dolapci
Muge Demirbilek
Alper Tekeli
Hande Arslan
Ankara University · TRBaşkent University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicobacter pylori exists in two morphologic forms: spiral shaped and coccoid. The nonculturable coccoid forms were believed to be the morphologic manifestations of cell death for a long time. However, recent studies indicate the viability of such forms. This form of H. pylori is now suspected to play a role in the transmission of the bacteria and is partly responsible for relapse of infection after antimicrobial treatment. Urease activity of H. pylori is an important maintenance factor. Determination of urease activity and possible mutations in the DNA sequences of coccoid bacteria will hence contribute to the understanding of pathogenesis of infections, which these forms might be responsible for. In this study, our aim was to analyze the urease activity and investigate the urease gene sequences of coccoid H. pylori forms induced by different factors with respect to the spiral form. For this purpose, the urease activities of H. pylori NCTC 11637 standard strain and two clinical isolates were examined before and after transformation of the cells to coccoid forms by different methods such as exposure to amoxicillin, aerobiosis, cold starvation, and aging. The effects of these conditions on the urease gene were examined by the amplification of 411-bp ureA gene and 115-bp ureB gene regions by PCR technique and sequencing of the ureA gene. The urease activities of coccoid cells were found to be lower than those of the spiral form. ureA and ureB gene regions were amplified in all coccoid cells by PCR. Inducing the change to coccoid form by different methods was found to have no effect on the nucleotide sequence of the ureA gene. These results show that the urease gene region of coccoid H. pylori is highly protected under various mild environmental conditions.

Indexed as

Sequence Analysis, DNAAerobiosisAmoxicillinBase SequenceDNA, BacterialHelicobacter InfectionsHelicobacter pyloriHumansMolecular Sequence DataPolymerase Chain ReactionUreaseAmoxicillinDNA, BacterialUrease

Identifiers

PMID18167027
OpenAlexW2077405952

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.