Evidence map›Paper›PMID 18165369›Full record

ArticleApplied and environmental microbiology2008

Strategy for in situ detection of natural transformation-based horizontal gene transfer events.

Aurora Rizzi, Alessandra Pontiroli, Lorenzo Brusetti, Sara Borin, Claudia Sorlini, Alessandro Abruzzese, Gian Attilio Sacchi, Timothy M Vogel, Pascal Simonet, Marco Bazzicalupo and 3 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Elucidating the Role of Virulence Traits in the Survival of PathogenicFrontiers in bioengineering and biotechnology · 2020
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Aurora RizziDipartimento di Scienze e Tecnologie Alimentari e Microbiologiche, Università degli Studi di Milano, Via Celoria 2, 20133 Milano, Italy.
Alessandra Pontiroli
Lorenzo Brusetti
Sara Borin
Claudia Sorlini
Alessandro Abruzzese
Gian Attilio Sacchi
Timothy M Vogel
Pascal Simonet
Marco Bazzicalupo
Kaare Magne Nielsen
Jean-Michel Monier
Daniele Daffonchio

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A strategy is described that enables the in situ detection of natural transformation in Acinetobacter baylyi BD413 by the expression of a green fluorescent protein. Microscale detection of bacterial transformants growing on plant tissues was shown by fluorescence microscopy and indicated that cultivation-based selection of transformants on antibiotic-containing agar plates underestimates transformation frequencies.

Indexed as

AcinetobacterGenetic TechniquesGene Transfer, HorizontalGreen Fluorescent ProteinsMicroscopy, FluorescenceTransformation, BacterialGreen Fluorescent Proteins

Identifiers

PMID18165369
PMCPMC2258602

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.