Evidence map›Paper›PMID 18163389›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2008

Family-based SNP association study on 8q24 in bipolar disorder.

Peter P Zandi, Sebastian Zöllner, Dimitrios Avramopoulos, Virginia L Willour, Yi Chen, Zhaohui S Qin, Margit Burmeister, Kuangyi Miao, Shyam Gopalakrishnan, Richard McEachin and 3 more

Open access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 3 pooled it
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 3 syntheses or guidelines pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  5. CaFrontiers in pharmacology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Peter P ZandiDepartment of Mental Health, Johns Hopkins School of Public Health, Baltimore, Maryland 21205, USA. pzandi@jhsph.edu
Sebastian Zöllner
Dimitrios Avramopoulos
Virginia L Willour
Yi Chen
Zhaohui S Qin
Margit Burmeister
Kuangyi Miao
Shyam Gopalakrishnan
Richard McEachin
James B Potash
J Raymond Depaulo
Melvin G McInnis
University of Michigan–Ann Arbor · USJohns Hopkins University · USBloomberg (United States) · US

Funding

Nation Center- Integrative Biomedical Informatics(RMI)U54DA021519 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ATHEY, BRIAN DAVID · 2005 to 2010
$21.3M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
Fine mapping 8q24 in Familial Bipolar DisorderR01MH070775 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MCINNIS, MELVIN G · 2005 to 2007
$969k
BIOINFORMATICS TO DISCOVER GENES IN PSYCHIATRIC ILLNESSK01MH072866 · NIMH · JOHNS HOPKINS UNIVERSITY · PI ZANDI, PETER P. · 2005 to 2009
$724k
NHGRI NIH HHS N01 HG065403NHGRI NIH HHS N01-HG 65403NIDA NIH HHS U54 DA021519NIDA NIH HHS U54-DA021519NIMH NIH HHS K01 MH072866NIMH NIH HHS K01 MH72866NIMH NIH HHS R01 MH070775NIMH NIH HHS R01 MH70775
6 · The paper itself

Abstract

Previous linkage studies have identified chromosome 8q24 as a promising positional candidate region to search for bipolar disorder (BP) susceptibility genes. We, therefore, sought to identify BP susceptibility genes on chromosome 8q24 using a family-based association study of a dense panel of SNPs selected to tag the known common variation across the region of interest. A total of 1,458 SNPs across 16 Mb of 8q24 were examined in 3,512 subjects, 1,954 of whom were affected with BP, from 737 multiplex families. Single-locus tests were carried out with FBAT and Geno-PDT, and multi-locus test were carried out with HBAT and multi-locus Geno-PDT. None of the SNPs were associated with BP in the single-locus tests at a level that exceeded our threshold for study-wide significance (P < 3.00 x 10(-5)). However, there was consistent evidence at our threshold for the suggestive level (P < 7.00 x 10(-4)) from both the single locus and multi-locus tests of associations with SNPs in the genes ADCY8, ST3GAL1, and NSE2. Multi-locus analyses suggested joint effects between ADCY8 and ST3GAL1 (P = 3.00 x 10(-4)), with at least one copy of the "high risk" allele required at both genes for association with BP, consistent with a jointly dominant-dominant model of action. These findings with ADCY8 and ST3GAL1 warrant further investigation in order to confirm the observed associations and their functional significance for BP susceptibility.

Indexed as

Bipolar DisorderChromosomes, Human, Pair 8FemaleGenes, DominantGenotypeHumansMalePolymorphism, Single Nucleotide

Identifiers

PMID18163389
PMCPMC2700285
OpenAlexW2030371411

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.