Evidence map›Paper›PMID 18158132›Full record

ReviewMethods (San Diego, Calif.)2008

Experimental validation of miRNA targets.

Donald E Kuhn, Mickey M Martin, David S Feldman, Alvin V Terry, Gerard J Nuovo, Terry S Elton

Abstract readReview
In one paragraph

Review in Methods (San Diego, Calif.), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 195 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
195citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

195 citing papers in PubMed, 3 syntheses or guidelines pooled it.

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135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Donald E KuhnDavis Heart and Lung Research Institute, The Ohio State University, DHLRI 515, 473 West 12th Avenue, Columbus, OH 43210, USA.
Mickey M Martin
David S Feldman
Alvin V Terry
Gerard J Nuovo
Terry S Elton

Funding

HUMAN ANGIOTENSIN II RECEPTOR GENE REGULATIONR01HL048848 · NHLBI · OHIO STATE UNIVERSITY · PI ELTON, TERRY S · 1997 to 2009
$2.1M
Adrenergically Mediated Remodeling in Nonischemic Heart FailureR01HL084498 · NHLBI · OHIO STATE UNIVERSITY · PI FELDMAN, DAVID SETH · 2007 to 2012
$1.8M
NHLBI NIH HHS R01 HL048848NHLBI NIH HHS R01 HL084498
6 · The paper itself

Abstract

MicroRNAs are natural, single-stranded, small RNA molecules that regulate gene expression by binding to target mRNAs and suppress its translation or initiate its degradation. In contrast to the identification and validation of many miRNA genes is the lack of experimental evidence identifying their corresponding mRNA targets. The most fundamental challenge in miRNA biology is to define the rules of miRNA target recognition. This is critical since the biological role of individual miRNAs will be dictated by the mRNAs that they regulate. Therefore, only as target mRNAs are validated will it be possible to establish commonalities that will enable more precise predictions of miRNA/mRNA interactions. Currently there is no clear agreement as to what experimental procedures should be followed to demonstrate that a given mRNA is a target of a specific miRNA. Therefore, this review outlines several methods by which to validate miRNA targets. Additionally, we propose that multiple criteria should be met before miRNA target validation should be considered "confirmed."

Indexed as

Validation Studies as TopicAnimalsComputational BiologyHumansMicroRNAsSequence Analysis, RNAMicroRNAs

Identifiers

PMID18158132
PMCPMC2237914

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.