Evidence map›Paper›PMID 18154269›Full record

ArticleACS chemical biology2007

Mechanisms of resistance to an amino acid antibiotic that targets translation.

Sandro F Ataide, Sharnise N Wilson, Sandy Dang, Theresa E Rogers, Bappaditya Roy, Rajat Banerjee, Tina M Henkin, Michael Ibba

Erratum issuedAbstract read
In one paragraph

Article in ACS chemical biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The current riboswitch landscape inMicrobiology (Reading, England) · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. A Riboswitch-Driven Era of New Antibacterials.Antibiotics (Basel, Switzerland) · 2022
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Deep scanning lysine metabolism inMolecular systems biology · 2018
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Structure and mechanism of purine-binding riboswitches.Quarterly reviews of biophysics · 2012
    Review
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Sandro F AtaideDepartment of Microbiology, The Ohio State University, Columbus, Ohio 43210-1292, USA.
Sharnise N Wilson
Sandy Dang
Theresa E Rogers
Bappaditya Roy
Rajat Banerjee
Tina M Henkin
Michael Ibba
State Library of Ohio · USUniversity of Calcutta · INThe Ohio State University · US

Funding

Mechanisms of translational controlR01GM065183 · NIGMS · OHIO STATE UNIVERSITY · PI DUNHAM, CHRISTINE M, FREDRICK, KURT L · 2003 to 2020
$4.9M
REGULATION OF METHIONINE METABOLISM IN BACILLUS SUBTILISR01GM063615 · NIGMS · OHIO STATE UNIVERSITY · PI HENKIN, TINA M. · 2001 to 2013
$3.7M
Lysine recognition by lysine-binding regulatory RNAsF31GM076894 · NIGMS · OHIO STATE UNIVERSITY · PI WILSON, SHARNISE N · 2006 to 2010
$165k
NIGMS NIH HHS F31 GM076894NIGMS NIH HHS F31GM076894NIGMS NIH HHS GM63615NIGMS NIH HHS GM65183NIGMS NIH HHS R01 GM063615NIGMS NIH HHS R01 GM065183
6 · The paper itself

Abstract

Structural and functional diversity among the aminoacyl-tRNA synthetases prevent infiltration of the genetic code by noncognate amino acids. To explore whether these same features distinguish the synthetases as potential sources of resistance against antibiotic amino acid analogues, we investigated bacterial growth inhibition by S-(2-aminoethyl)-L-cysteine (AEC). Wild-type lysyl-tRNA synthetase (LysRS) and a series of active site variants were screened for their ability to restore growth of an Escherichia coli LysRS null strain at increasing concentrations of AEC. While wild-type E. coli growth is completely inhibited at 5 microM AEC, two LysRS variants, Y280F and F426W, provided substantial resistance and allowed E. coli to grow in the presence of up to 1 mM AEC. Elevated resistance did not reflect changes in the kinetics of amino acid activation or tRNA (Lys) aminoacylation, which showed at best 4-6-fold improvements, but instead correlated with the binding affinity for AEC, which was decreased approximately 50-fold in the LysRS variants. In addition to changes in LysRS, AEC resistance has also been attributed to mutations in the L box riboswitch, which regulates expression of the lysC gene, encoding aspartokinase. The Y280F and F426W LysRS mutants contained wild-type L box riboswitches that responded normally to AEC in vitro, indicating that LysRS is the primary cellular target of this antibiotic. These findings suggest that the AEC resistance conferred by L box mutations is an indirect effect resulting from derepression of lysC expression and increased cellular pools of lysine, which results in more effective competition with AEC for binding to LysRS.

Indexed as

Anti-Bacterial AgentsBinding SitesCysteineDrug Resistance, BacterialEnzyme InhibitorsEscherichia coliLysine-tRNA LigaseMicrobial ViabilityProtein BiosynthesisAnti-Bacterial AgentsCysteineEnzyme InhibitorsLysine-tRNA LigaseS-2-aminoethyl cysteine

Identifiers

PMID18154269
PMCPMC2386896
OpenAlexW2021587613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.