Evidence map›Paper›PMID 18097091›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2008

Structure of HsaD, a steroid-degrading hydrolase, from Mycobacterium tuberculosis.

Nathan Lack, Edward D Lowe, Jie Liu, Lindsay D Eltis, Martin E M Noble, Edith Sim, Isaac M Westwood

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

  1. Degradation of CCurrent microbiology · 2025
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  11. Updating and curating metabolic pathways of TB.Tuberculosis (Edinburgh, Scotland) · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Nathan LackDepartment of Pharmacology, University of Oxford, Mansfield Road, Oxford OX1 3QT, England.
Edward D Lowe
Jie Liu
Lindsay D Eltis
Martin E M Noble
Edith Sim
Isaac M Westwood
University of Oxford · GBMansfield University · USUniversity of British Columbia · CA

Funding

CIHR 84357Wellcome Trust
6 · The paper itself

Abstract

Tuberculosis is a major cause of death worldwide. Understanding of the pathogenicity of Mycobacterium tuberculosis has been advanced by gene analysis and has led to the identification of genes that are important for intracellular survival in macrophages. One of these genes encodes HsaD, a meta-cleavage product (MCP) hydrolase that catalyzes the hydrolytic cleavage of a carbon-carbon bond in cholesterol metabolism. This paper describes the production of HsaD as a recombinant protein and, following crystallization, the determination of its three-dimensional structure to 2.35 A resolution by X-ray crystallography at the Diamond Light Source in Oxfordshire, England. To the authors' knowledge, this study constitutes the first report of a structure determined at the new synchrotron facility. The volume of the active-site cleft of the HsaD enzyme is more than double the corresponding active-site volumes of related MCP hydrolases involved in the catabolism of aromatic compounds, consistent with the specificity of HsaD for steroids such as cholesterol. Knowledge of the structure of the enzyme facilitates the design of inhibitors.

Indexed as

Amino Acid SequenceBacterial ProteinsCloning, MolecularConserved SequenceHydrolasesModels, MolecularMolecular Sequence DataMycobacterium tuberculosisProtein ConformationRecombinant ProteinsSequence AlignmentSteroid HydroxylasesBacterial ProteinsHsaD protein, Mycobacterium tuberculosisHydrolasesRecombinant ProteinsSteroid Hydroxylases

Identifiers

PMID18097091
PMCPMC2373992
OpenAlexW2091115575

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.