Evidence map›Paper›PMID 18094994›Full record

ArticlePlanta2008

Characterization of leafy cotyledon1-like during embryogenesis in Theobroma cacao L.

Laurence Alemanno, Martine Devic, Nicolas Niemenak, Christine Sanier, Jocelyne Guilleminot, Mariannick Rio, Jean-Luc Verdeil, Pascal Montoro

Abstract read
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In one paragraph

Article in Planta, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Review
  3. Genome-Wide Identification ofPlants (Basel, Switzerland) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Laurence AlemannoCentre de Coopération Internationale en Recherche Agronomique pour le Développement, CIRAD, UMR DAP, TA A-96/03, Avenue Agropolis, 34398 Montpellier Cedex 5, France.
Martine Devic
Nicolas Niemenak
Christine Sanier
Jocelyne Guilleminot
Mariannick Rio
Jean-Luc Verdeil
Pascal Montoro
Agropolis International · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRLaboratoire Génome et Développement des Plantes · FRUniversité de Perpignan · FRUniversité de Yaoundé I · CM

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Theobroma cacao L., an economically important crop for developing countries, can be experimentally propagated by somatic embryogenesis. Because of their potential roles in embryogenesis, a gene candidate strategy was initiated to find gene homologues of the members of the leafy cotyledon family of transcription factors. A homologue of the leafy cotyledon1-like gene, that encodes the HAP 3 subunit of the CCAAT box-binding factor, was found in the cocoa genome (TcL1L). The translated peptide shared a high amino acid sequence identity with the homologous genes of Arabidopsis thaliana, Phaseolus coccineus and Helianthus annuus. TcL1L transcripts mainly accumulated in young and immature zygotic embryos, and, to a lesser extent, in young and immature somatic embryos. In situ hybridization specified the localization of the transcripts as being mainly in embryonic cells of young embryos, the meristematic cells of the shoot and root apex of immature embryos, and in the protoderm and epidermis of young and immature embryos, either zygotic or somatic. Non-embryogenic explants did not show TcL1L expression. Ectopic expression of the TcL1L gene could partially rescue the Arabidopsis lec1 mutant phenotype, suggesting a similarity of function in zygotic embryogenesis.

Indexed as

Amino Acid SequenceArabidopsisBlotting, SouthernCacaoGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenetic Complementation TestIn Situ HybridizationMolecular Sequence DataMutationPlant ProteinsPlants, Genetically ModifiedReverse Transcriptase Polymerase Chain ReactionSequence Homology, Amino AcidTransformation, GeneticPlant Proteins

Identifiers

PMID18094994
OpenAlexW2153565247

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.