Evidence map›Paper›PMID 18093540›Full record

ArticleImmunity2007

Opposing functions of the T cell receptor kinase ZAP-70 in immunity and tolerance differentially titrate in response to nucleotide substitutions.

Owen M Siggs, Lisa A Miosge, Adèle L Yates, Edyta M Kucharska, Daniel Sheahan, Tomas Brdicka, Arthur Weiss, Adrian Liston, Christopher C Goodnow

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 1 synthesis or guideline pooled it, 139 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Reporters of TCR signaling identify arthritogenic T cells in murine and human autoimmune arthritis.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Article
  14. An association study in PTPN22 suggests that is a risk factor to Takayasu's arteritis.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2019
    Article
  15. Article
  16. ZAP-70 in Signaling, Biology, and Disease.Annual review of immunology · 2018
    Review
  17. The Balance of Th17 versus Treg Cells in Autoimmunity.International journal of molecular sciences · 2018
    Review
  18. Review
  19. Article
  20. B cell autoimmunity at the extremes.Nature immunology · 2017
    Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Owen M SiggsJohn Curtin School of Medical Research and Australian Phenomics Facility, The Australian National University, Canberra 2601, Australia.
Lisa A Miosge
Adèle L Yates
Edyta M Kucharska
Daniel Sheahan
Tomas Brdicka
Arthur Weiss
Adrian Liston
Christopher C Goodnow
Australian National University · AUHoward Hughes Medical Institute · USUniversity of California, San Francisco · US

Funding

Systems Biology CoreU19AI100627 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2012 to 2021
$49.1M
Genes for Tolerance and Immunity ConsortiumR01AI052127 · NIAID · AUSTRALIAN NATIONAL UNIVERSITY · PI GOODNOW, CHRISTOPHER CARL · 2002 to 2006
$6.3M
NIAID NIH HHS R01 AI052127NIAID NIH HHS R01 AI52127NIAID NIH HHS U19 AI100627
6 · The paper itself

Abstract

Null mutations that cripple T cell receptor (TCR) signaling explain rare primary immunodeficiencies, but it is not understood why more common polymorphisms that lead to subtle TCR signaling defects are paradoxically associated with autoimmunity. Here we analyzed how a series of Zap70 variants with step-wise decreases in TCR signaling impacted upon opposing TCR functions of immunity and tolerance. One Zap70 variant, murdock, moderately decreased TCR signaling and thymic selection without compromising immunological tolerance, whereas a more severe Zap70 defect, mrtless, abolished thymic-positive selection and led to immunodeficiency. Signaling capacities between these two thresholds disproportionately compromised negative selection and Foxp3(+) regulatory T cell formation, creating a cellular imbalance between immunogenic and tolerogenic functions that resulted in the excessive production of autoantibodies and immunoglobulin E (IgE). The pleiotropic functions of ZAP-70 and their differential response to graded variation provide a paradigm for understanding the complex outcomes of human genetic variation.

Indexed as

Immune ToleranceImmunityAmino Acid SubstitutionAnimalsAutoantibodiesImmunoglobulin EImmunoglobulin GMaleMiceMice, Inbred C57BLReceptors, Antigen, T-CellSignal TransductionStructure-Activity RelationshipT-Lymphocytes, Helper-InducerZAP-70 Protein-Tyrosine KinaseAutoantibodiesImmunoglobulin EImmunoglobulin GReceptors, Antigen, T-CellZAP-70 Protein-Tyrosine Kinase

Identifiers

PMID18093540
PMCPMC3163119
OpenAlexW2110421291

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.