Evidence map›Paper›PMID 18093315›Full record

ArticleBMC developmental biology2007

Identification of a novel conserved mixed-isoform B56 regulatory subunit and spatiotemporal regulation of protein phosphatase 2A during Xenopus laevis development.

Sungmin Baek, Joni M Seeling

Abstract read
In one paragraph

Article in BMC developmental biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Evolutionary Analysis of the B56 Gene Family of PP2A Regulatory Subunits.International journal of molecular sciences · 2015
    Article
  4. Article
  5. Review
  6. Molecular correlates of laminar differences in the macaque dorsal lateral geniculate nucleus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sungmin BaekDepartment of Biology, City University of New York, Queens College, 65-30 Kissena Blvd,, Flushing, NY 11367, USA. sbaek100@qc.cuny.edu
Joni M Seeling

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWnt signaling is a key regulator of development and tumorigenesis. Protein phosphatase 2A (PP2A), which consists of a catalytic C, a structural A, and a regulatory B subunit, plays diverse roles in Wnt signaling through its B56 subunits. B56 is a multigene family encoding for proteins with a conserved core domain and divergent amino- and carboxy-termini. Ectopic B56alpha and B56gamma reduce beta-catenin abundance and B56alpha reduces Wnt-dependent transcription, suggesting that B56alpha and B56gamma inhibit Wnt signaling. In contrast, B56epsilon is required for Wnt signaling. Knowledge of where and when B56 subunits are expressed during Xenopus development will aid in our understanding of their roles in Wnt signaling.

resultsWe have undertaken expression analyses of B56alpha and B56gamma in Xenopus laevis. We cloned Xenopus B56alpha; it is 88% identical to human B56alpha. Xenopus B56gamma is 94% identical with human B56gamma, however, a novel evolutionarily conserved mixed-isoform transcript was identified that contains a B56delta-like amino-terminal domain and a B56gamma core domain. The B56delta-like variable domain exon is located upstream of the B56gamma variable domain exon at the human B56gamma locus, suggesting that the mixed-isoform transcript is due to alternative splicing. B56gamma transcripts with different 3' ends were identified that lack or possess a 35 base pair sequence, resulting in either a transcript similar to human B56gamma1, or an uncharacterized evolutionarily conserved sequence. Real time RT-PCR analyses revealed that B56alpha is expressed at moderate levels before the midblastula transition (MBT), at reduced levels during gastrulation and neurulation, and at high levels during organogenesis, while B56gamma is expressed at low levels until organogenesis. B56alpha is enriched in the ventral hemisphere pre-MBT, while B56gamma is ventrally enriched post-MBT. Aalpha, Abeta, Calpha and Cbeta are expressed in early Xenopus development, suggesting the presence of a functional heterotrimer.

conclusionOur data suggest that B56 functional diversity is achieved in part through the synthesis of a novel mixed-isoform B56delta/gamma transcript. Our data also suggest that B56alpha functions pre-MBT, inhibiting Wnt signaling on the ventral side of the embryo, and again during organogenesis, while B56gamma functions primarily post-MBT.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCatalytic DomainCell PolarityEmbryo, NonmammalianGene Expression Regulation, EnzymologicGene LibraryIsoenzymesMorphogenesisProtein Phosphatase 2Reverse Transcriptase Polymerase Chain ReactionSequence Analysis, DNASignal TransductionWnt ProteinsXenopus laevisXenopus ProteinsIsoenzymesProtein Phosphatase 2Wnt8b protein, XenopusWnt ProteinsXenopus Proteins

Identifiers

PMID18093315
PMCPMC2257934

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.