Evidence map›Paper›PMID 18087701›Full record

ArticlePlant cell reports2008

Stability of the T-DNA flanking regions in transgenic Arabidopsis thaliana plants under influence of abiotic stress and cultivation practices.

Nina Papazova, Rim Ghedira, Sabine Van Glabeke, Aghleb Bartegi, Pieter Windels, Isabel Taverniers, Isabel Roldan-Ruiz, Erik Van Bockstaele, Anne Milcamps, Guy Van Den Eede and 2 more

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Article in Plant cell reports, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Nina PapazovaInstitute for Agricultural and Fisheries Research, Burg. Van Gansberghelaan 115, 9820, Merelbeke, Belgium. nina.papazova@ilvo.vlaanderen.be
Rim Ghedira
Sabine Van Glabeke
Aghleb Bartegi
Pieter Windels
Isabel Taverniers
Isabel Roldan-Ruiz
Erik Van Bockstaele
Anne Milcamps
Guy Van Den Eede
Ann Depicker
Marc De Loose

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic transformation is often associated with different rearrangements of the plant genome at the site of insertion. Therefore the question remains weather these T-DNA insertion sites are more prone to genotoxic stresses. Here, we studied the impact of propagation through generations, the influence of gene stacking and of photo oxidative stress caused by high light intensity on the stability of the transgene flanking regions in the model plant Arabidopsis thaliana. Conformational Sensitive Capillary Electrophoresis (CSCE), RFLP and sequencing were deployed in this analysis in order to study the proximal 100 bp and the long-range T-DNA flanking sequences. By screening seven transgenic lines no evidence for occurrence of mutation events were found, implying that the nucleotide sequence of the T-DNA flanking regions of the studied events is unlikely to be unstable.

Indexed as

Plants, Genetically Modified3' Flanking Region5' Flanking RegionArabidopsisDNA, BacterialDNA, PlantMutationDNA, BacterialDNA, PlantT-DNA

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.