Evidence map›Paper›PMID 18084290›Full record

ArticleNature genetics2008

ITPKC functional polymorphism associated with Kawasaki disease susceptibility and formation of coronary artery aneurysms.

Yoshihiro Onouchi, Tomohiko Gunji, Jane C Burns, Chisato Shimizu, Jane W Newburger, Mayumi Yashiro, Yoshikazu Nakamura, Hiroshi Yanagawa, Keiko Wakui, Yoshimitsu Fukushima and 20 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 239 papers, 11 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
239citing papers in PubMed, 11 pooled it
22.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

239 citing papers in PubMed, 11 syntheses or guidelines pooled it, 518 citations in OpenAlex.

  1. Pooled it
  2. Intravenous immunoglobulin for the treatment of Kawasaki disease.The Cochrane database of systematic reviews · 2023
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  8. TNF-α blockers for the treatment of Kawasaki disease in children.The Cochrane database of systematic reviews · 2019
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179 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 20 institutions in 2 countries.

Yoshihiro OnouchiLaboratory for Gastrointestinal Diseases, SNP Research Center, RIKEN, Yokohama, Kanagawa, 230-0045, Japan. onouchi@src.riken.jp
Tomohiko Gunji
Jane C Burns
Chisato Shimizu
Jane W Newburger
Mayumi Yashiro
Yoshikazu Nakamura
Hiroshi Yanagawa
Keiko Wakui
Yoshimitsu Fukushima
Fumio Kishi
Kunihiro Hamamoto
Masaru Terai
Yoshitake Sato
Kazunobu Ouchi
Tsutomu Saji
Akiyoshi Nariai
Yoichi Kaburagi
Tetsushi Yoshikawa
Kyoko Suzuki
Takeo Tanaka
Toshiro Nagai
Hideo Cho
Akihiro Fujino
Akihiro Sekine
Reiichiro Nakamichi
Tatsuhiko Tsunoda
Tomisaku Kawasaki
Yusuke Nakamura
Akira Hata
RIKEN Center for Integrative Medical Sciences · JPKawasaki Medical School · JPShinshu University · JPTokyo University of Science · JPYokohama Minami Kyosai Hospital · JPBoston Children's Hospital · USChiba Cancer Center · JPDokkyo Medical University Saitama Medical Center · JPFujita Health University · JPFukuoka University · JPJichi Medical University · JPKawasaki Municipal Hospital · JPKeio University · JPKure Medical Center · JPRady Children's Hospital-San Diego · USSaitama Prefectural University · JPSubaru (Japan) · JPToho University · JPTokyo Women's Medical University · JPToyokawa City Hospital · JP

Funding

Genetic Markers and gene expression in Kawasaki DiseaseR01HL069413 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURNS, JANE C · 2002 to 2010
$5.5M
NHLBI NIH HHS HL69413NHLBI NIH HHS R01 HL069413
6 · The paper itself

Abstract

Kawasaki disease is a pediatric systemic vasculitis of unknown etiology for which a genetic influence is suspected. We identified a functional SNP (itpkc_3) in the inositol 1,4,5-trisphosphate 3-kinase C (ITPKC) gene on chromosome 19q13.2 that is significantly associated with Kawasaki disease susceptibility and also with an increased risk of coronary artery lesions in both Japanese and US children. Transfection experiments showed that the C allele of itpkc_3 reduces splicing efficiency of the ITPKC mRNA. ITPKC acts as a negative regulator of T-cell activation through the Ca2+/NFAT signaling pathway, and the C allele may contribute to immune hyper-reactivity in Kawasaki disease. This finding provides new insights into the mechanisms of immune activation in Kawasaki disease and emphasizes the importance of activated T cells in the pathogenesis of this vasculitis.

Indexed as

Genetic Predisposition to DiseasePolymorphism, GeneticAsian PeopleChromosomes, Human, Pair 19Coronary AneurysmHumansLinkage DisequilibriumLymphocyte ActivationMucocutaneous Lymph Node SyndromePhosphotransferases (Alcohol Group Acceptor)Polymorphism, Single NucleotideRNA SplicingT-LymphocytesInositol 1,4,5-trisphosphate 3-kinasePhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID18084290
PMCPMC2876982
OpenAlexW2018040903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.