Evidence map›Paper›PMID 18083832›Full record

ArticleEukaryotic cell2008

Atf2 transcription factor binds to the APP1 promoter in Cryptococcus neoformans: stimulatory effect of diacylglycerol.

Nicola Tommasino, Maristella Villani, Asfia Qureshi, Jennifer Henry, Chiara Luberto, Maurizio Del Poeta

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Lipid signalling in pathogenic fungi.Cellular microbiology · 2011
    Review
  8. Article
  9. Sphingolipid signaling in fungal pathogens.Advances in experimental medicine and biology · 2010
    Review
  10. App1: an antiphagocytic protein that binds to complement receptors 3 and 2.Journal of immunology (Baltimore, Md. : 1950) · 2009
    Article
  11. Lipid signaling in pathogenic fungi.Annual review of microbiology · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nicola TommasinoDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425, USA.
Maristella Villani
Asfia Qureshi
Jennifer Henry
Chiara Luberto
Maurizio Del Poeta
Medical University of South Carolina · US

Funding

THE ROLE OF LACTOSYLCERAMIDE IN RENAL AGING AND DISEASEP20RR017677 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI HSU, YI-TE · 2002 to 2011
$23.4M
Sphingolipid-mediated fungal pathogenesisR01AI056168 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI DEL POETA, MAURIZIO · 2004 to 2013
$2.7M
MUSC FACIL EXPANSION &RENOV: SLE C06RR015455 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI RAYMOND, JOHN R · 2002 to 2002
$2.0M
Role of phagocytosis in pathogenesis of Cryptococcus neorformansR01AI071142 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI DEL POETA, MAURIZIO · 2008 to 2012
$1.7M
NCRR NIH HHS C06 RR015455NCRR NIH HHS P20 RR017677NCRR NIH HHS RR17677NIAID NIH HHS AI56168NIAID NIH HHS AI71142NIAID NIH HHS R01 AI056168NIAID NIH HHS R01 AI071142
6 · The paper itself

Abstract

The fungus Cryptococcus neoformans is an environmental human pathogen which enters the lung via the respiratory tract and produces a unique protein, called antiphagocytic protein 1 (App1), that protects it from phagocytosis by macrophages. In previous studies, we proposed genetic evidences that transcription of APP1 is controlled by the enzymatic reaction catalyzed by inositol phosphorylceramide synthase 1 (Ipc1) via the production of diacylglycerol through the activating transcription factor 2 (Atf2). We investigated here the mechanism by which Atf2 binds to the APP1 promoter in vitro and in vivo. To this end, we produced Atf2 recombinant proteins (rAtf2) and found that rAtf2 binds to ATF cis-acting element present in the APP1 promoter. Indeed, mutation of two key nucleotides in the ATF consensus sequence abolishes the binding of rAtf2 to the APP1 promoter. Next, we produced C. neoformans strains with a hemagglutinin-tagged ATF2 gene and showed that endogenous Atf2 binds to APP1 promoter in vivo. Finally, by a novel DNA protein-binding precipitation assay, we showed that treatment with 1,2-dioctanoylglycerol positively increases binding of Atf2-APP1 promoter in vivo. These studies provide new insights into the molecular mechanism by which Atf2 regulates APP1 transcription in vivo with important implications for a better understanding of how C. neoformans escapes the phagocytic process.

Indexed as

Gene Expression Regulation, FungalTranscription, GeneticActivating Transcription Factor 2Binding SitesChromatin ImmunoprecipitationCryptococcus neoformansDiglyceridesElectrophoretic Mobility Shift AssayLuciferasesMicrofilament ProteinsPlasmidsPromoter Regions, GeneticRecombinant ProteinsRegulatory Sequences, Nucleic AcidRNA, MessengerTranscriptional Activation1,2-diacylglycerolActivating Transcription Factor 2DiglyceridesLuciferasesMicrofilament ProteinsRecombinant ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID18083832
PMCPMC2238156
OpenAlexW2098195961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.