Evidence map›Paper›PMID 18083159›Full record

ArticleDevelopmental biology2008

Direct control of the proneural gene atonal by retinal determination factors during Drosophila eye development.

Miho Tanaka-Matakatsu, Wei Du

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Patterning of theFrontiers in cell and developmental biology · 2023
    Review
  3. Review
  4. Hexagonal patterning of the Drosophila eye.Developmental biology · 2021
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. The fly eye: Through the looking glass.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Miho Tanaka-MatakatsuBen May Department for Cancer Research, The University of Chicago, 929 E. 57th Street, Chicago, IL 60637, USA.
Wei Du
University of Chicago · US

Funding

Control of Cell Proliferation and Differentiation in the Developing RetinaR01GM074197 · NIGMS · UNIVERSITY OF CHICAGO · PI DU, WEI · 2006 to 2013
$2.4M
NIGMS NIH HHS R01 GM074197NIGMS NIH HHS R01GM074197
6 · The paper itself

Abstract

The determination of neuronal identity in Drosophila cells depends on the accurate expression of proneural genes. The proneural gene atonal (ato) encodes a basic-HLH protein required for photoreceptor and chordotonal organ formation. The initial expression of ato in imaginal discs is regulated by sequences that lie 3' to its open reading frame. In this report, we show that the initial ato transcription in different imaginal discs is regulated by distinct 3' cis-regulatory sequences. The eye-specific ato 3' cis-regulatory sequence consists of two distinct elements we term 2.8 PB and 3.6 BP that regulate ato transcription during different stages of eye development. The 2.8 PB enhancer contains a highly conserved consensus binding site for the retinal determination (RD) factor Sine oculis (So). Mutation of this So binding site abolishes 2.8 PB enhancer activity. Furthermore the RD factors So and Eyes absent (Eya) are required for 2.8 PB enhancer activity and can induce ectopic 2.8 PB reporter expression. In contrast, ectopic Dpp signaling is not sufficient to induce ato 3' enhancer activation but can induce increased levels of RD factor Dachshund (Dac) and synergize with So and Eya to increase ato 3' enhancer activity. These results demonstrate a direct mechanism by which the RD factors regulate ato expression and suggest an important role of Dpp in the activation of ato 3' enhancer is to regulate the levels of RD factors.

Indexed as

Gene Expression Regulation, DevelopmentalGenes, InsectOrganogenesisAnimalsAnimals, Genetically ModifiedBasic Helix-Loop-Helix ProteinsBinding SitesDrosophilaDrosophila ProteinsEmbryo, NonmammalianEnhancer Elements, GeneticEyeEye ProteinsFluorescent Antibody Technique, IndirectGenes, ReporterGreen Fluorescent Proteinsato protein, DrosophilaBasic Helix-Loop-Helix Proteinsdac protein, Drosophiladpp protein, DrosophilaDrosophila Proteinseya protein, DrosophilaEye ProteinsGreen Fluorescent ProteinsHomeodomain ProteinsNerve Tissue ProteinsNuclear ProteinsRNA, MessengerSo protein, Drosophila

Identifiers

PMID18083159
PMCPMC2231519
OpenAlexW2112562250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.