Evidence map›Paper›PMID 18082611›Full record

ArticleMolecular cell2007

Structural organization of the anaphase-promoting complex bound to the mitotic activator Slp1.

Melanie D Ohi, Anna Feoktistova, Liping Ren, Calvin Yip, Yifan Cheng, Jun-Song Chen, Hyun-Joo Yoon, Joseph S Wall, Zhong Huang, Pawel A Penczek and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
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  8. While the revolution will not be crystallized, biochemistry reigns supreme.Protein science : a publication of the Protein Society · 2017
    Review
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  10. Article
  11. Review
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  14. Review
  15. Article
  16. Article
  17. Panta rhei: the APC/C at steady state.The Journal of cell biology · 2013
    Review
  18. Article
  19. Article
  20. Structural insights into anaphase-promoting complex function and mechanism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Melanie D OhiDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Anna Feoktistova
Liping Ren
Calvin Yip
Yifan Cheng
Jun-Song Chen
Hyun-Joo Yoon
Joseph S Wall
Zhong Huang
Pawel A Penczek
Kathleen L Gould
Thomas Walz
Howard Hughes Medical Institute · USHarvard University · USThe University of Texas Health Science Center at Houston · USBrookhaven National Laboratory · US

Funding

Single particle reconstructionP01GM062580 · NIGMS · HARVARD MEDICAL SCHOOL · PI HARRISON, STEPHEN COPLAN · 2001 to 2016
$23.7M
SPARX--AUTOMATED SINGLE PARTICLE RECONSTRUCTION SOFTWAREP01GM064692 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI FRANK, JACHIM · 2003 to 2007
$8.7M
HIGH RESOLUTION IN SINGLE PARTICLE RECONSTRUCTIONR01GM060635 · NIGMS · WADSWORTH CENTER · PI PENCZEK, PAWEL A. · 2000 to 2016
$4.3M
STEM Mass Mapping &Heavy Atom Labeling of BiomoleculesP41EB002181 · NIBIB · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI WALL, JOSEPH S · 2003 to 2006
$3.3M
NIBIB NIH HHS 5 P41 EB2181NIBIB NIH HHS P41 EB002181NIGMS NIH HHS GM 60635NIGMS NIH HHS GM62580NIGMS NIH HHS P01 GM062580NIGMS NIH HHS P01 GM064692NIGMS NIH HHS R01 GM060635
6 · The paper itself

Abstract

The anaphase-promoting complex/cyclosome (APC/C) is a conserved multisubunit E3 ubiquitin (Ub) ligase required to signal the degradation of key cell-cycle regulators. Using single particle cryo-electron microscopy (cryo-EM), we have determined a three-dimensional (3D) structure of the core APC/C from Schizosaccharomyces pombe bound to the APC/C activator Slp1/Cdc20. At the 27 A resolution of our density map, the APC/C is a triangular-shaped structure, approximately 19x17x15 nm in size, with a deep internal cavity and a prominent horn-like protrusion emanating from a lip of the cavity. Using antibody labeling and mutant analysis, we have localized 12 of 13 core APC/C components, as well as the position of the activator Slp1, enabling us to propose a structural model of APC/C organization. Comparison of the APC/C with another multiprotein E3 ligase, the SCF complex, uncovers remarkable structural similarities.

Indexed as

Anaphase-Promoting Complex-CyclosomeCdc20 ProteinsCell Cycle ProteinsChromatography, AffinityCryoelectron MicroscopyImmunoblottingMitosisModels, MolecularMutagenesis, Site-DirectedMutationProtein ConformationSchizosaccharomycesSchizosaccharomyces pombe ProteinsUbiquitinationUbiquitin-Protein Ligase ComplexesUbiquitin-Protein LigasesAnaphase-Promoting Complex-CyclosomeCdc20 ProteinsCell Cycle ProteinsSchizosaccharomyces pombe Proteinsslp1 protein, S pombeUbiquitin-Protein Ligase ComplexesUbiquitin-Protein Ligases

Identifiers

PMID18082611
PMCPMC2197158
OpenAlexW2044255079

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.