Evidence map›Paper›PMID 18082602›Full record

ArticleMolecular cell2007

Coordinated control of dCTCF and gypsy chromatin insulators in Drosophila.

Tatiana I Gerasimova, Elissa P Lei, Ashley M Bushey, Victor G Corces

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 135 citations in OpenAlex.

  1. Article
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  8. Article
  9. Review
  10. Article
  11. Article
  12. Developing in 3D: the role of CTCF in cell differentiation.Development (Cambridge, England) · 2018
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Epigenetics & chromatin · 2017
    Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tatiana I GerasimovaDepartment of Biology, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD 21218, USA.
Elissa P Lei
Ashley M Bushey
Victor G Corces
Johns Hopkins University · US

Funding

MOLECULAR BASIS OF SUPPRESSION IN DROSOPHILAR01GM035463 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CORCES, VICTOR G. · 1986 to 2020
$10.7M
Chromatin Organization and RNA silencingZ01DK015601 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI LEI, ELISSA · 2007 to 2008
$996k
NIGMS NIH HHS GM35463NIGMS NIH HHS R01 GM035463
6 · The paper itself

Abstract

CTCF plays a central role in vertebrate insulators and forms part of the Fab-8 insulator in Drosophila. dCTCF is present at hundreds of sites in the Drosophila genome, where it is located at the boundaries between bands and interbands in polytene chromosomes. dCTCF colocalizes with CP190, which is required for proper binding of dCTCF to chromatin, but not with the other gypsy insulator proteins Su(Hw) or Mod(mdg4)2.2. Mutations in the CP190 gene affect Fab-8 insulator activity, suggesting that CP190 is an essential component of both gypsy and dCTCF insulators. dCTCF is present at specific nuclear locations, forming large insulator bodies that overlap with those formed by Su(Hw), Mod(mdg4)2.2, and CP190. The results suggest that Su(Hw) and dCTCF may be the DNA-binding components of two different subsets of insulators that share CP190 and cooperate in the formation of insulator bodies to regulate the organization of the chromatin fiber in the nucleus.

Indexed as

AnimalsAnimals, Genetically ModifiedBinding SitesCCCTC-Binding FactorCell NucleusChromatinChromatin ImmunoprecipitationDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsIn Situ HybridizationInsulator ElementsMicrotubule-Associated ProteinsMutationNuclear ProteinsRepressor ProteinsCCCTC-Binding FactorChromatinCP190 protein, DrosophilaCTCF protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsMicrotubule-Associated Proteinsmod(mdg4) protein, DrosophilaNuclear ProteinsRepressor Proteinssu(Hw) protein, DrosophilaTranscription Factors

Identifiers

PMID18082602
PMCPMC2579779
OpenAlexW2139564227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.