Evidence map›Paper›PMID 18080179›Full record

ArticleJournal of computational neuroscience2008

An experimentally constrained computational model of NMDA oscillations in lamprey CPG neurons.

Mikael Huss, Di Wang, Camilla Trané, Martin Wikström, Jeanette Hellgren Kotaleski

Abstract read
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Article in Journal of computational neuroscience, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Can simple rules control development of a pioneer vertebrate neuronal network generating behavior?The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mikael HussSchool of Computer Science and Communication, Royal Institute of Technology, 100 44, Stockholm, Sweden. hussm@nada.kth.se
Di Wang
Camilla Trané
Martin Wikström
Jeanette Hellgren Kotaleski
Karolinska Institutet · SEKTH Royal Institute of Technology · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhythmicity is a characteristic of neural networks responsible for locomotion. In many organisms, activation of N-methyl-D: -aspartate (NMDA) receptors leads to generation of rhythmic locomotor patterns. In addition, single neurons can display intrinsic, NMDA-dependent membrane potential oscillations when pharmacologically isolated from each other by tetrodotoxin (TTX) application. Such NMDA-TTX oscillations have been characterized, for instance, in lamprey locomotor network neurons. Conceptual and computational models have been put forward to explain the appearance and characteristics of these oscillations. Here, we seek to refine the understanding of NMDA-TTX oscillations by combining new experimental evidence with computational modelling. We find that, in contrast to previous computational predictions, the oscillation frequency tends to increase when the NMDA concentration is increased. We develop a new, minimal computational model which can incorporate this new information. This model is further constrained by another new piece of experimental evidence: that regular-looking NMDA-TTX oscillations can be obtained even after voltage-dependent potassium and high-voltage-activated calcium channels have been pharmacologically blocked. Our model conforms to several experimentally derived criteria that we have set up and is robust to parameter changes, as evaluated through sensitivity analysis. We use the model to re-analyze an old NMDA-TTX oscillation model, and suggest an explanation of why it failed to reproduce the new experimental data that we present here.

Indexed as

Models, NeurologicalAnimalsBiological ClocksCalcium Channel BlockersCalcium SignalingExcitatory Amino Acid AntagonistsIn Vitro TechniquesLampreysMagnesiumMembrane PotentialsNerve NetNeuronsNimodipineN-Methylaspartateomega-Conotoxin GVIAPeriodicityCalcium Channel BlockersExcitatory Amino Acid AntagonistsMagnesiumNimodipineN-Methylaspartateomega-Conotoxin GVIAPotassiumPotassium Channels, Calcium-ActivatedPotassium Channels, Voltage-GatedReceptors, N-Methyl-D-AspartateSodium Channel BlockersTetraethylammoniumTetrodotoxin

Identifiers

PMID18080179
OpenAlexW1994558574

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.