ArticleBiological journal of the Linnean Society. Linnean Society of London2004
The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects.
Article in Biological journal of the Linnean Society. Linnean Society of London, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
30 citing papers in PubMed, 78 citations in OpenAlex.
- Impact of U2-type introns on splice site prediction in A. thaliana species using deep learning.BMC bioinformatics · 2025Article
- Autopolyploids of Arabidopsis thaliana are more phenotypically plastic than their diploid progenitors.Annals of botany · 2023Article
- Editorial: Model organisms in plant science:Frontiers in plant science · 2023Article
- Molecular evolution of the ATP-binding cassette subfamily G member 2 gene subfamily and its paralogs in birds.BMC evolutionary biology · 2020Article
- Article
- Deciphering the physiological and molecular mechanisms for copper tolerance in autotetraploid Arabidopsis.Plant cell reports · 2017Article
- Altered chromatin compaction and histone methylation drive non-additive gene expression in an interspecific Arabidopsis hybrid.Genome biology · 2017Article
- Evolution of Gene Expression Balance Among Homeologs of Natural Polyploids.G3 (Bethesda, Md.) · 2017Article
- Ploidy effect and genetic architecture exploration of stalk traits using DH and its corresponding haploid populations in maize.BMC plant biology · 2016Article
- Genomic incompatibilities in the diploid and tetraploid offspring of the goldfish × common carp cross.Proceedings of the National Academy of Sciences of the United States of America · 2016Article
- Reference genes for normalizing transcription in diploid and tetraploid Arabidopsis.Scientific reports · 2014Article
- Polyploidy in the Arabidopsis genus.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2014Review
- Morphological, cytological and metabolic consequences of autopolyploidization in Hylocereus (Cactaceae) species.BMC plant biology · 2013Article
- Ploidy and Hybridity Effects on Growth Vigor and Gene Expression in Arabidopsis thaliana Hybrids and Their Parents.G3 (Bethesda, Md.) · 2012Article
- Intergenomic rearrangements after polyploidization of Kengyilia thoroldiana (Poaceae: Triticeae) affected by environmental factors.PloS one · 2012Article
- Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus.Proceedings of the National Academy of Sciences of the United States of America · 2011Article
- A comparative study of salt tolerance parameters in 11 wild relatives of Arabidopsis thaliana.Journal of experimental botany · 2010Article
- The allotetraploid Arabidopsis thaliana-Arabidopsis lyrata subsp. petraea as an alternative model system for the study of polyploidy in plants.Molecular genetics and genomics : MGG · 2009Article
- Analysis of gene expression in resynthesized Brassica napus Allopolyploids using arabidopsis 70mer oligo microarrays.PloS one · 2009Article
- Article
Corrections and comments
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Authors and funding
18 authors at 5 institutions in 1 country.
Funding
Abstract
Arabidopsis is a model system not only for studying numerous aspects of plant biology, but also for understanding mechanisms of the rapid evolutionary process associated with genome duplication and polyploidization. Although in animals interspecific hybrids are often sterile and aneuploids are related to disease syndromes, both Arabidopsis autopolyploids and allopolyploids occur in nature and can be readily formed in the laboratory, providing an attractive system for comparing changes in gene expression and genome structure among relatively 'young' and 'established' or 'ancient' polyploids. Powerful reverse and forward genetics in Arabidopsis offer an exceptional means by which regulatory mechanisms of gene and genome duplication may be revealed. Moreover, the Arabidopsis genome is completely sequenced; both coding and non-coding sequences are available. We have developed spotted oligo-gene and chromosome microarrays using the complete Arabidopsis genome sequence. The oligo-gene microarray consists of ~26 000 70-mer oligonucleotides that are designed from all annotated genes in Arabidopsis, and the chromosome microarray contains 1 kb genomic tiling fragments amplified from a chromosomal region or the complete sequence of chromosome 4. We have demonstrated the utility of microarrays for genome-wide analysis of changes in gene expression, genome organization and chromatin structure in Arabidopsis polyploids and related species.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.