Evidence map›Paper›PMID 18079403›Full record

ArticleScience (New York, N.Y.)2007

Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression.

Sylvain Egloff, Dawn O'Reilly, Rob D Chapman, Alice Taylor, Katrin Tanzhaus, Laura Pitts, Dirk Eick, Shona Murphy

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 160 papers.

0numbers the graph read from it
0cells of the map it votes in
160citing papers in PubMed
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

160 citing papers in PubMed, 275 citations in OpenAlex.

  1. Review
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  4. Article
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  7. Article
  8. Article
  9. RNA Pol II Assembly Affects ncRNA Expression.International journal of molecular sciences · 2023
    Article
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  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

100 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Sylvain EgloffSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.
Dawn O'Reilly
Rob D Chapman
Alice Taylor
Katrin Tanzhaus
Laura Pitts
Dirk Eick
Shona Murphy
University of Oxford · GB

Funding

Medical Research Council G0400653Medical Research Council G0400653(71330)Medical Research Council G9826944Wellcome Trust 072107Wellcome Trust 081312
6 · The paper itself

Abstract

RNA polymerase II (Pol II) transcribes genes that encode proteins and noncoding small nuclear RNAs (snRNAs). The carboxyl-terminal repeat domain (CTD) of the largest subunit of mammalian RNA Pol II, comprising tandem repeats of the heptapeptide consensus Tyr1-Ser2-Pro3-Thr4-Ser5-Pro6-Ser7, is required for expression of both gene types. We show that mutation of serine-7 to alanine causes a specific defect in snRNA gene expression. We also present evidence that phosphorylation of serine-7 facilitates interaction with the snRNA gene-specific Integrator complex. These findings assign a biological function to this amino acid and highlight a gene type-specific requirement for a residue within the CTD heptapeptide, supporting the existence of a CTD code.

Indexed as

Gene Expression RegulationTranscription, GeneticAlanineAmino Acid SequenceCell LineConsensus SequenceHeterogeneous-Nuclear RibonucleoproteinsHumansMutationOligopeptidesPhosphorylationProtein Structure, TertiaryProtein SubunitsRNA, MessengerRNA Polymerase IIRNA Processing, Post-TranscriptionalAlanineHeterogeneous-Nuclear RibonucleoproteinsOligopeptidesProtein SubunitsRNA, MessengerRNA Polymerase IIRNA, Small NuclearSerineU2 small nuclear RNA

Identifiers

PMID18079403
PMCPMC2263945
OpenAlexW2051231585

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.