Evidence map›Paper›PMID 18077706›Full record

ArticleJournal of virology2008

Coronavirus escape from heptad repeat 2 (HR2)-derived peptide entry inhibition as a result of mutations in the HR1 domain of the spike fusion protein.

Berend Jan Bosch, John W A Rossen, Willem Bartelink, Stephanie J Zuurveen, Cornelis A M de Haan, Stephane Duquerroy, Charles A B Boucher, Peter J M Rottier

Abstract read
In one paragraph

Article in Journal of virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
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  5. Article
  6. Exploring the genomic and proteomic variations of SARS-CoV-2 spike glycoprotein: A computational biology approach.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Evaluating MERS-CoV Entry Pathways.Methods in molecular biology (Clifton, N.J.) · 2020
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Berend Jan BoschVirology Division, Department of Infectious Diseases and Immunology, Utrecht University, Faculty of Veterinary Medicine, and Institute of Biomembranes, Yalelaan 1, 3584 CL Utrecht, The Netherlands.
John W A Rossen
Willem Bartelink
Stephanie J Zuurveen
Cornelis A M de Haan
Stephane Duquerroy
Charles A B Boucher
Peter J M Rottier

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peptides based on heptad repeat (HR) domains of class I viral fusion proteins are considered promising antiviral drugs targeting virus cell entry. We have analyzed the evolution of the mouse hepatitis coronavirus during multiple passaging in the presence of an HR2-based fusion inhibitor. Drug-resistant variants emerged as a result of multiple substitutions in the spike fusion protein, notably within a 19-residue segment of the HR1 region. Strikingly, one mutation, an A1006V substitution, which consistently appeared first in four independently passaged viruses, was the main determinant of the resistance phenotype, suggesting that only limited options exist for escape from the inhibitory effect of the HR2 peptide.

Indexed as

Membrane FusionMutationAnimalsCell LineCoronavirusMembrane GlycoproteinsMicePeptidesRepetitive Sequences, Amino AcidSpike Glycoprotein, CoronavirusViral Envelope ProteinsMembrane GlycoproteinsPeptidesSpike Glycoprotein, CoronavirusViral Envelope Proteins

Identifiers

PMID18077706
PMCPMC2258948

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.