Evidence map›Paper›PMID 18074101›Full record

ArticleJournal of human genetics2008

Gene dosage change of TPTE and BAGE2 and breakpoint analysis in Robertsonian Down syndrome.

Sheng-Wen Shaw, Chih-Ping Chen, Po-Jen Cheng, Tzu-Hao Wang, Jia-Woei Hou, Cheng-Tao Lin, Shuenn-Dhy Chang, Hsiao-Lin Hwa, Ju-Li Lin, An-Shine Chao and 2 more

Open access · bronzeAbstract readComparative StudyMulticenter Study
PubMed Publisher
In one paragraph

Article in Journal of human genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Sheng-Wen ShawDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Chih-Ping ChenDepartment of Obstetrics and Gynecology, and Medical Research, Mackay Memorial Hospital, Taipei, Taiwan.
Po-Jen ChengDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Tzu-Hao WangDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Jia-Woei HouChang Gung University College of Medicine, Taoyuan, Taiwan.
Cheng-Tao LinDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Shuenn-Dhy ChangDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Hsiao-Lin HwaInstitute of Molecular Medicine, National Taiwan University College of Medicine, Taipei, Taiwan.
Ju-Li LinChang Gung University College of Medicine, Taoyuan, Taiwan.
An-Shine ChaoDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Yung-Kuei SoongDepartment of Obstetrics and Gynecology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, 333, Taiwan.
Fon-Jou HsiehInstitute of Molecular Medicine, National Taiwan University College of Medicine, Taipei, Taiwan. fjhsieh@ntu.edu.tw.
Chang Gung Memorial Hospital · TWChang Gung University · TWNational Taiwan University · TWAsia University · TWNational Taiwan University Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Only 4% of Down syndrome (DS) cases have a Robertsonian translocation (ROB). The aim of this study was to define the possible breakage area in 21p where ROB occurs. We prospectively and consecutively collected ten cases ROB DS from three medical centers. Of the ten DS children, six were de novo (60%), and four were due to paternal or maternal inheritance (40%). They consisted of four der(21q;21q), four der(14q;21q), one der(13q;21q), and one der(21q;22q). The origin of the extra chromosome 21q was maternal in five of six de novo ROB and paternal in one case. All four der(21;21) ROB DS were an isochromosome. The result of gene dosage change by real-time quantitative polymerase chain reaction (PCR) was compatible with array-comparative genomic hybridization in one case. We further used real-time PCR to detect the copy number of TPTE and BAGE2 located on 21p11 and SAMSN1 on 21q11. The ratio of copy number in 21p:21q was 1:3 in der(21q;21q) but 2:3 in der(13q;21q), der(14q;21q), and der(21q;22q). Our preliminary results demonstrated the critical breakpoint of chromosome 21 involving ROB might lie between BAGE2 and the centromere, located from 10.1 to 12.3 Mb.

Indexed as

Chromosome BreakageGene DosageAdaptor Proteins, Vesicular TransportAdultAntigens, NeoplasmChildChild, PreschoolChromosomes, Human, Pair 13Chromosomes, Human, Pair 14Chromosomes, Human, Pair 21Down SyndromeFemaleGenetic Predisposition to DiseaseGenome, HumanHumansInfantAdaptor Proteins, Vesicular TransportAntigens, NeoplasmBAGE2 protein, humanMembrane ProteinsPTEN PhosphohydrolaseRNA, MessengerSAMSN1 protein, humanTPTE protein, human

Identifiers

PMID18074101
OpenAlexW2126490661

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.