Evidence map›Paper›PMID 18071589›Full record

ArticleInternational journal of biological sciences2007

Concerted transcriptional regulation by BRCA1 and COBRA1 in breast cancer cells.

Sarah E Aiyar, HyungJun Cho, Jae Lee, Rong Li

Open access · goldAbstract read
In one paragraph

Article in International journal of biological sciences, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sarah E Aiyar1. Department of Biochemistry, Molecular Genetics, University of Virginia, Charlottesville, VA 22908, USA.
HyungJun Cho
Jae Lee
Rong Li
University of Virginia · USThe University of Texas Health Science Center at San Antonio · US

Funding

BRCA1 IN GENE REGULATION AND TUMOR SUPPRESSIONR01CA093506 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LI, RONG · 2002 to 2010
$2.3M
A Novel Corepressor of Estrogen ReceptorR01DK064604 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LI, RONG · 2004 to 2007
$1.0M
NCI NIH HHS CA93506NCI NIH HHS R01 CA093506NIDDK NIH HHS DK064604NIDDK NIH HHS R01 DK064604
6 · The paper itself

Abstract

Cofactor of BRCA1 (COBRA1) was first identified as a protein that binds to the breast cancer susceptibility gene product BRCA1. COBRA1 modulates estrogen-dependent and independent transcription and suppresses the growth of breast cancer cells. Its expression is significantly reduced in metastatic and recurrent breast cancer, pointing to a tumor suppressor function in breast cancer development. In light of these initial implications of COBRA1 in human breast cancer, the current investigation sought to obtain more direct functional evidence that links COBRA1 with BRCA1 in transcriptional regulation in breast cancer cells. Small hairpin RNA (shRNA)-mediated gene knockdown and gene expression microarray were used to study the impact of COBRA1 and BRCA1 on global transcription in the same breast cancer cell background. The gene expression profiling study in tissue culture cells uncovers a significant overlap of COBRA1- and BRCA1-regulated genes, many of which have been previously implicated in breast cancer progression. The data shown herein support the notion that COBRA1 and BRCA1 may engage in common gene regulatory pathways to suppress breast cancer progression.

Indexed as

Gene Expression Regulation, NeoplasticAdenocarcinomaBRCA1 ProteinBreast NeoplasmsCell Line, TumorDisease ProgressionGene Expression ProfilingGenome, HumanHumansNuclear ProteinsTranscription FactorsBRCA1 Proteinnegative elongation factorNuclear ProteinsTranscription FactorsBRCA1breast cancer.COBRA1shRNA knockdowntranscription regulation

Identifiers

PMID18071589
PMCPMC2096739
OpenAlexW2134458250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.