Evidence map›Paper›PMID 18070937›Full record

ArticleThe Journal of experimental medicine2007

Alu elements mediate MYB gene tandem duplication in human T-ALL.

Jennifer O'Neil, Joelle Tchinda, Alejandro Gutierrez, Lisa Moreau, Richard S Maser, Kwok-Kin Wong, Wei Li, Keith McKenna, X Shirley Liu, Bin Feng and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 94 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Transcription Factor MYB as Therapeutic Target: Current Developments.International journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. The Genetics and Mechanisms of T-Cell Acute Lymphoblastic Leukemia.Cold Spring Harbor perspectives in medicine · 2020
    Review
  17. Review
  18. c-MYB and DMTF1 in Cancer.Cancer investigation · 2019
    Review
  19. Review
  20. Mammalian transposable elements and their impacts on genome evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Jennifer O'NeilDepartment of Pediatric Oncology, Belfer Foundation Institute for Innovative Cancer Science, Dana-Farber Cancer Institute, Boston, MA 02115, USA.
Joelle Tchinda
Alejandro Gutierrez
Lisa Moreau
Richard S Maser
Kwok-Kin Wong
Wei Li
Keith McKenna
X Shirley Liu
Bin Feng
Donna Neuberg
Lewis Silverman
Daniel J DeAngelo
Jeffery L Kutok
Rodney Rothstein
Ronald A DePinho
Lynda Chin
Charles Lee
A Thomas Look
Pediatric Oncology Group · CAHarvard University · USBrigham and Women's Hospital · USDana-Farber Cancer Institute · USColumbia University Irving Medical Center · USPediatrics and Genetics · US

Funding

Zebrafish Screens for Genetic Modifiers and Human Application in T-ALLP01CA068484 · NCI · DANA-FARBER CANCER INSTITUTE · PI ARMSTRONG, SCOTT A · 1995 to 2010
$31.9M
The Molecular Function of D-cyclins in T-ALLP01CA109901 · NCI · DANA-FARBER CANCER INSTITUTE · PI ALT, FREDERICK W. · 2004 to 2014
$19.6M
Mechanism of spontaneous and DSB-induced repairR37GM050237 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2005 to 2014
$6.0M
Genetics of the formation of repair &reombination fociR01GM067055 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2003 to 2014
$4.3M
MECHANISM OF SPONTANEOUS AND DSB-INDUCED REPAIRR01GM050237 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI ROTHSTEIN, RODNEY J. · 1993 to 2016
$3.0M
Molecular Cytogenetic Tools for the ZebrafishR01CA111560 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI LEE, CHARLES · 2004 to 2008
$1.6M
Alternate Spliced Repair Transcripts &Genome StabilityR21CA115853 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2005 to 2006
$270k
NCI NIH HHS CA109901NCI NIH HHS CA11560NCI NIH HHS CA115853NCI NIH HHS CA68484-11NCI NIH HHS P01 CA068484NCI NIH HHS P01 CA109901NCI NIH HHS R01 CA111560NCI NIH HHS R21 CA115853NIGMS NIH HHS GM050237NIGMS NIH HHS GM067055NIGMS NIH HHS R01 GM050237NIGMS NIH HHS R01 GM067055NIGMS NIH HHS R37 GM050237
6 · The paper itself

Abstract

Recent studies have demonstrated that the MYB oncogene is frequently duplicated in human T cell acute lymphoblastic leukemia (T-ALL). We find that the human MYB locus is flanked by 257-bp Alu repeats and that the duplication is mediated somatically by homologous recombination between the flanking Alu elements on sister chromatids. Nested long-range PCR analysis indicated a low frequency of homologous recombination leading to MYB tandem duplication in the peripheral blood mononuclear cells of approximately 50% of healthy individuals, none of whom had a MYB duplication in the germline. We conclude that Alu-mediated MYB tandem duplication occurs at low frequency during normal thymocyte development and is clonally selected during the molecular pathogenesis of human T-ALL.

Indexed as

Gene DuplicationAlu ElementsBase SequenceHumansIn Situ Hybridization, FluorescenceLeukemia-Lymphoma, Adult T-CellModels, BiologicalModels, GeneticMolecular Sequence DataNucleic Acid HybridizationPolymerase Chain ReactionProto-Oncogene Proteins c-mybRecombination, GeneticProto-Oncogene Proteins c-myb

Identifiers

PMID18070937
PMCPMC2150982
OpenAlexW2141718437

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.