Evidence map›Paper›PMID 18065688›Full record

ArticleThe Plant cell2007

Plastid signals remodel light signaling networks and are essential for efficient chloroplast biogenesis in Arabidopsis.

Michael E Ruckle, Stephanie M DeMarco, Robert M Larkin

Abstract read
In one paragraph

Article in The Plant cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed.

  1. Review
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  9. Mitochondrial ATP SynthaseInternational journal of molecular sciences · 2024
    Article
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  15. Review
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  19. Review
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57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Michael E RuckleMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824, USA.
Stephanie M DeMarco
Robert M Larkin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plastid signals are among the most potent regulators of genes that encode proteins active in photosynthesis. Plastid signals help coordinate the expression of the nuclear and chloroplast genomes and the expression of genes with the functional state of the chloroplast. Here, we report the isolation of new cryptochrome1 (cry1) alleles from a screen for Arabidopsis thaliana genomes uncoupled mutants, which have defects in plastid-to-nucleus signaling. We also report genetic experiments showing that a previously unidentified plastid signal converts multiple light signaling pathways that perceive distinct qualities of light from positive to negative regulators of some but not all photosynthesis-associated nuclear genes (PhANGs) and change the fluence rate response of PhANGs. At least part of this remodeling of light signaling networks involves converting HY5, a positive regulator of PhANGs, into a negative regulator of PhANGs. We also observed that mutants with defects in both plastid-to-nucleus and cry1 signaling exhibited severe chlorophyll deficiencies. These data show that the remodeling of light signaling networks by plastid signals is a mechanism that plants use to integrate signals describing the functional and developmental state of plastids with signals describing particular light environments when regulating PhANG expression and performing chloroplast biogenesis.

Indexed as

LightArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsChlorophyllChloroplastsCotyledonCryptochromesDNA-Binding ProteinsFlavoproteinsGene Expression Regulation, PlantModels, BiologicalNuclear ProteinsPlants, Genetically ModifiedPlastidsReverse Transcriptase Polymerase Chain ReactionArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsChlorophyllCRY1 protein, ArabidopsisCryptochromesDNA-Binding ProteinsFlavoproteinsGUN1 protein, ArabidopsisHY5 protein, ArabidopsisNuclear Proteins

Identifiers

PMID18065688
PMCPMC2217644

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.