Evidence map›Paper›PMID 18065608›Full record

ArticleApplied and environmental microbiology2008

First detection of mycobacteria in African rodents and insectivores, using stratified pool screening.

Lies Durnez, Miriam Eddyani, Georgies F Mgode, Abdul Katakweba, Charles R Katholi, Robert R Machang'u, Rudovik R Kazwala, Françoise Portaels, Herwig Leirs

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 63 citations in OpenAlex.

  1. The State-of-the-Art ofHealthcare (Basel, Switzerland) · 2024
    Review
  2. Not OnlyPathogens (Basel, Switzerland) · 2022
    Review
  3. The Presence ofMicroorganisms · 2022
    Article
  4. Article
  5. Review
  6. Frontiers in veterinary science · 2020
    Article
  7. Article
  8. Bias Correction in Estimating Proportions by Pooled Testing.Journal of agricultural, biological, and environmental statistics · 2017
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Lies DurnezDepartment of Biology, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium. lies.durnez@ua.ac.be
Miriam Eddyani
Georgies F Mgode
Abdul Katakweba
Charles R Katholi
Robert R Machang'u
Rudovik R Kazwala
Françoise Portaels
Herwig Leirs
Sokoine University of Agriculture · TZInstituut voor Tropische Geneeskunde · BEAarhus University · DKUniversity of Alabama at Birmingham · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the rising number of patients with human immunodeficiency virus (HIV)/AIDS in developing countries, the control of mycobacteria is of growing importance. Previous studies have shown that rodents and insectivores are carriers of mycobacteria. However, it is not clear how widespread mycobacteria are in these animals and what their role is in spreading them. Therefore, the prevalence of mycobacteria in rodents and insectivores was studied in and around Morogoro, Tanzania. Live rodents were trapped, with three types of live traps, in three habitats. Pieces of organs were pooled per habitat, species, and organ type (stratified pooling); these sample pools were examined for the presence of mycobacteria by PCR, microscopy, and culture methods. The mycobacterial isolates were identified using phenotypic techniques and sequencing. In total, 708 small mammals were collected, 31 of which were shrews. By pool prevalence estimation, 2.65% of the animals were carriers of mycobacteria, with a higher prevalence in the urban areas and in Cricetomys gambianus and the insectivore Crocidura hirta. Nontuberculous mycobacteria (Mycobacterium chimaera, M. intracellulare, M. arupense, M. parascrofulaceum, and Mycobacterium spp.) were isolated from C. gambianus, Mastomys natalensis, and C. hirta. This study is the first to report findings of mycobacteria in African rodents and insectivores and the first in mycobacterial ecology to estimate the prevalence of mycobacteria after stratified pool screening. The fact that small mammals in urban areas carry more mycobacteria than those in the fields and that potentially pathogenic mycobacteria were isolated identifies a risk for other animals and humans, especially HIV/AIDS patients, that have a weakened immune system.

Indexed as

AnimalsBacteriological TechniquesCulture MediaMycobacteriumMycobacterium InfectionsPolymerase Chain ReactionPrevalenceRodent DiseasesRodentiaShrewsTanzaniaCulture Media

Identifiers

PMID18065608
PMCPMC2227704
OpenAlexW2168210546

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.