Evidence map›Paper›PMID 18065420›Full record

ArticleThe Journal of biological chemistry2008

Domain architecture and biochemical characterization of vertebrate Mcm10.

Patrick D Robertson, Eric M Warren, Haijiang Zhang, David B Friedman, Jeffrey W Lary, James L Cole, Antonin V Tutter, Johannes C Walter, Ellen Fanning, Brandt F Eichman

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Mechanism of eukaryotic origin unwinding is a dual helicase DNA shearing process.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Review
  6. Von Willebrand Factor Facilitates Intravascular Dissemination of MicrosporidiaFrontiers in cellular and infection microbiology · 2021
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Mcm10 has potent strand-annealing activity and limits translocase-mediated fork regression.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Patrick D RobertsonDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee 37232.
Eric M WarrenDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee 37232.
Haijiang ZhangDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee 37232.
David B FriedmanDepartment of Biochemistry, Vanderbilt University, Nashville, Tennessee 37232.
Jeffrey W LaryNational Analytical Ultracentrifugation Facility, University of Connecticut, Storrs, Connecticut 06269.
James L ColeNational Analytical Ultracentrifugation Facility, University of Connecticut, Storrs, Connecticut 06269.
Antonin V TutterDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115.
Johannes C WalterDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115.
Ellen FanningDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee 37232.
Brandt F EichmanDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee 37232; Department of Biochemistry, Vanderbilt University, Nashville, Tennessee 37232; Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37232. Electronic address: brandt.eichman@vanderbilt.edu.
Vanderbilt University · USHarvard University · USUniversity of Connecticut · US

Funding

Structural Biology Facility CoreP30ES000267 · NIEHS · VANDERBILT UNIVERSITY · PI GUENGERICH, F PETER · 1985 to 2014
$20.3M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
CONTROL OF SIMIAN VIRUS 40 AND CELLULAR DNA REPLICATIONR01GM052948 · NIGMS · VANDERBILT UNIVERSITY · PI FRIEDMAN, KATHERINE LOUISE · 1995 to 2013
$6.1M
Structural mechanisms of Mcm10 in DNA replicationR01GM080570 · NIGMS · VANDERBILT UNIVERSITY · PI EICHMAN, BRANDT F · 2007 to 2010
$1.1M
NIEHS NIH HHS P30 ES000267NIGMS NIH HHS GM080570NIGMS NIH HHS GM52948NIGMS NIH HHS R01 GM052948NIGMS NIH HHS R01 GM080570NIGMS NIH HHS T32 GM008320NIGMS NIH HHS T32 GM08320
6 · The paper itself

Abstract

Mcm10 plays a key role in initiation and elongation of eukaryotic chromosomal DNA replication. As a first step to better understand the structure and function of vertebrate Mcm10, we have determined the structural architecture of Xenopus laevis Mcm10 (xMcm10) and characterized each domain biochemically. Limited proteolytic digestion of the full-length protein revealed N-terminal-, internal (ID)-, and C-terminal (CTD)-structured domains. Analytical ultracentrifugation revealed that xMcm10 self-associates and that the N-terminal domain forms homodimeric assemblies. DNA binding activity of xMcm10 was mapped to the ID and CTD, each of which binds to single- and double-stranded DNA with low micromolar affinity. The structural integrity of xMcm10-ID and CTD is dependent on the presence of bound zinc, which was experimentally verified by atomic absorption spectroscopy and proteolysis protection assays. The ID and CTD also bind independently to the N-terminal 323 residues of the p180 subunit of DNA polymerase alpha-primase. We propose that the modularity of the protein architecture, with discrete domains for dimerization and for binding to DNA and DNA polymerase alpha-primase, provides an effective means for coordinating the biochemical activities of Mcm10 within the replisome.

Indexed as

Amino Acid SequenceAnimalsAnisotropyCell Cycle ProteinsDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA ReplicationEdetic AcidHumansMinichromosome Maintenance ProteinsMolecular Sequence DataProtein BindingProtein ConformationProtein Structure, TertiarySpectrometry, FluorescenceXenopus laevisCell Cycle ProteinsDNA-Binding ProteinsDNA-Directed DNA PolymeraseEdetic AcidMcm10 protein, XenopusMinichromosome Maintenance Proteins

Identifiers

PMID18065420
PMCPMC2753450
OpenAlexW1967998674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.