Evidence map›Paper›PMID 18064403›Full record

ArticlePlant molecular biology2008

Differential requirement for the function of SRD2, an snRNA transcription activator, in various stages of plant development.

Misato Ohtani, Taku Demura, Munetaka Sugiyama

Abstract read
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In one paragraph

Article in Plant molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Misato OhtaniPlant Science Center, RIKEN, Yokohama 230-0045, Japan.
Taku Demura
Munetaka Sugiyama
RIKEN Center for Sustainable Resource Science · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small nuclear RNA (snRNA) is a class of eukaryotic noncoding RNAs, which have essential roles in pre-mRNA splicing and rRNA processing. As these functions are fundamental to cell activities, the regulation of snRNA transcription should be a vital issue for all eukaryotes. Here we address developmental control of snRNA transcription and its significance through the analysis of the SRD2 gene of Arabidopsis (Arabidopsis thaliana), which encodes an activator of snRNA transcription. In young seedlings, a high level of SRD2 expression was observed in shoot and root apical meristems, leaf primordia, and root stele tissues, where a large amount of snRNA accumulated. In mature plants, SRD2 was highly expressed in developing leaves and flowers as well as apical meristems. Mutations in the SRD2 gene interfered with many, but not all, aspects of development in the regions that showed strong expression of SRD2. Of note, establishment of the fully active state of apical meristems in the seedling stage was very sensitive to the srd2-1 mutation, while maintenance of the established meristems was substantially insensitive. These results demonstrated differential requirement for the SRD2 function in various stages of plant development.

Indexed as

Transcriptional ActivationArabidopsisArabidopsis ProteinsFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGlucuronidaseIn Situ HybridizationMicroscopy, ConfocalMutationPlants, Genetically ModifiedRecombinant Fusion ProteinsRNA, Small NuclearTranscription FactorsArabidopsis ProteinsGlucuronidaseRecombinant Fusion ProteinsRNA, Small NuclearSRD2 protein, ArabidopsisTranscription Factors

Identifiers

PMID18064403
OpenAlexW2087437924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.