Evidence map›Paper›PMID 18060457›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2007

An intronic sequence mutated in flexed-tail mice regulates splicing of Smad5.

Shailaja Hegde, Laurie E Lenox, Andrew Lariviere, Prashanth Porayette, John M Perry, Michele Yon, Robert F Paulson

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Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  8. Development and differentiation of the erythroid lineage in mammals.Developmental and comparative immunology · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shailaja HegdeDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, The Center for Molecular Immunology and Infectious Disease, University Park, Pennsylvania 16802, USA.
Laurie E Lenox
Andrew Lariviere
Prashanth Porayette
John M Perry
Michele Yon
Robert F Paulson

Funding

Regulation of Erythropoiesis by BMP4 and Smad5R01HL070720 · NHLBI · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI PAULSON, ROBERT FRANK · 2002 to 2005
$1.1M
NHLBI NIH HHS R01 HL070720
6 · The paper itself

Abstract

Recent work has identified a growing body of evidence that subtle changes in noncoding sequences can result in significant pathology. These mutations, which would have been called silent polymorphisms in the past, affect gene transcription and mRNA splicing and lead to drastic changes in gene expression. Previous work from our lab has characterized the murine flexed-tail (f) mutation, which encodes Smad5, a transcription factor that functions downstream of the receptors for bone morphogenetic proteins (BMPs). f/f mice are unable to rapidly respond to acute anemia. Our analysis of these mice led to the development of a new model for stress erythropoiesis, where BMP4 expression in the spleen leads to the Smad5-dependent expansion of a specialized population of stress erythroid progenitors during the recovery from acute anemia. f/f mutant mice exhibit a defect in Smad5 mRNA splicing in the spleen such that the majority of Smad5 transcripts are two misspliced mRNAs. One of these mRNAs encodes a truncated form of Smad5 that inhibits BMP4 signaling when overexpressed. Here we show that a mutation in a poly(T) element in intron 4 causes the splicing defect in f/f mutant mice. This subtle mutation (loss of 1 or 2 Ts in a 16-T element) results in defects in splicing throughout the Smad5 gene. Furthermore, we show that this mutation results in tissue-specific splicing defects, which may explain why f/f mice are viable when Smad5-/- mice are embryonic lethal.

Indexed as

IntronsMutationAnimalsBase SequenceChromosome MappingCloning, MolecularDNA PrimersDNA RepairGene AmplificationMiceMice, Mutant StrainsMolecular Sequence DataRNA SplicingSmad5 ProteinDNA PrimersSmad5 ProteinSmad5 protein, mouse

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.