Evidence map›Paper›PMID 18057127›Full record

ArticleJournal of clinical microbiology2008

Development of a microtiter plate hybridization-based PCR-enzyme-linked immunosorbent assay for identification of clinically relevant human group A rotavirus G and P genotypes.

Norma Santos, Shinjiro Honma, Maria do Carmo S T Timenetsky, Alexandre C Linhares, Hiroshi Ushijima, George E Armah, Jon R Gentsch, Yasutaka Hoshino

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Application of PCR-ELISA in molecular diagnosis.BioMed research international · 2014
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Norma SantosDepartamento de Virologia, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, CCS-Bl. I, Ilha do Fundão, Rio de Janeiro 21.941-590, Brazil. nsantos@micro.ufrj.br
Shinjiro Honma
Maria do Carmo S T Timenetsky
Alexandre C Linhares
Hiroshi Ushijima
George E Armah
Jon R Gentsch
Yasutaka Hoshino

Funding

ISOLATION IN CELL CULTURE AND SEROTYPIC CHARACTERIZATION OF HUMAN ROTAVIRUSESZ01AI000339 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI HOSHINO, YASUTAKA · 1985 to 2008
$364k
Isolation And Serotypic Characterization Of Human And Animal RotavirusesZIAAI000339 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI HOSHINO, YASUTAKA · 2009 to 2010
$342k
Intramural NIH HHS
6 · The paper itself

Abstract

A microtiter plate hybridization-based PCR-enzyme-linked immunosorbent assay (PCR-ELISA) has been used for the detection and identification of a variety of microorganisms. Here, we report the development of a PCR-ELISA for the identification of clinically relevant human rotavirus VP7 (G1 to G6, G8 to G10, and G12) and VP4 (P[4], P[6], P[8], P[9], and P[14]) genotypes. The G and P types of reference human and animal rotavirus strains for which specific probes were available were correctly identified by the PCR-ELISA. In addition, reference strains bearing G or P genotypes for which specific probes were unavailable, such as G11, G14, P[3], P[10], and P[11], did not display any cross-reactivity to the probes. The usefulness of the assay was further evaluated by analyzing a total of 396 rotavirus-positive stool samples collected in four countries: Brazil, Ghana, Japan, and the United States. The results of this study showed that the PCR-ELISA was sensitive and easy to perform without the use of any expensive and sophisticated equipment, the reagents used are easy to obtain commercially and advantageous over multiplex PCR since more than one type-specific probe is used and the selection of probes is more flexible.

Indexed as

Antigens, ViralBrazilCapsid ProteinsEnzyme-Linked Immunosorbent AssayFecesGenotypeGhanaHumansJapanPolymerase Chain ReactionRotavirusRotavirus InfectionsSensitivity and SpecificityUnited StatesAntigens, ViralCapsid ProteinsVP4 protein, RotavirusVP7 protein, Rotavirus

Identifiers

PMID18057127
PMCPMC2238104

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.