Evidence map›Paper›PMID 18056422›Full record

ArticleGenes & development2007

Human Y5 RNA specializes a Ro ribonucleoprotein for 5S ribosomal RNA quality control.

J Robert Hogg, Kathleen Collins

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 76 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. IFN-γ-producing TScience translational medicine · 2024
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Towards an IdealInternational journal of molecular sciences · 2022
    Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Y RNAs: Biogenesis, Function and Implications for the Cardiovascular System.Advances in experimental medicine and biology · 2020
    Review
  18. The vault RNA ofThe Journal of biological chemistry · 2019
    Article
  19. YRNAs overexpression and potential implications in allergy.The World Allergy Organization journal · 2019
    Article
  20. Ro60 and Y RNAs: structure, functions, and roles in autoimmunity.Critical reviews in biochemistry and molecular biology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J Robert HoggDepartment of Molecular and Cell Biology, University of California at Berkely, Berkeley, California 94720, USA. jh2721@columbia.edu
Kathleen Collins
University of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Humans express four distinct non-protein-coding Y RNAs (ncRNAs). To investigate Y RNA functional diversification, we exploited an RNA-based affinity purification method to isolate ribonucleoproteins (RNPs) assembled on individual human Y RNAs. Silver staining and mass spectrometry revealed that the Ro and La proteins assemble with all Y RNAs, while additional proteins associate with specific Y RNAs. Unexpectedly, Y5 RNA uniquely copurified ribosomal protein L5 and its binding partner 5S RNA. These findings reveal a contribution of Y5 to 5S surveillance and suggest that interactions between Ro-Y5 and L5-5S RNPs establish 5S RNA as a target of quality control.

Indexed as

Affinity LabelsAutoantigensCarrier ProteinsCell LineDNA-Binding ProteinsGenetic VariationHumansNeoplasm ProteinsRecombinant Fusion ProteinsRepressor ProteinsRibonucleoproteinsRibosomal ProteinsRNA-Binding ProteinsRNA, Ribosomal, 5SRNA, Small CytoplasmicRNA Splicing FactorsAffinity LabelsAutoantigensCarrier ProteinsDNA-Binding ProteinsIFIT5 protein, humanNeoplasm Proteinspoly-U binding splicing factor 60KDaRecombinant Fusion ProteinsRepressor ProteinsRibonucleoproteinsribosomal protein L5Ribosomal ProteinsRNA-Binding ProteinsRNA, Ribosomal, 5SRNA, Small CytoplasmicRNA Splicing FactorsRNA, UntranslatedRO60 protein, humanSS-A Antigen

Identifiers

PMID18056422
PMCPMC2081973
OpenAlexW2157716442

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.