Evidence map›Paper›PMID 18056382›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2007

Analysis of the 5q31 33 locus shows an association between single nucleotide polymorphism variants in the IL-5 gene and symptomatic infection with the human blood fluke, Schistosoma japonicum.

Magda K Ellis, Zhen Zhen Zhao, Hong-Gen Chen, Grant W Montgomery, Yue-Sheng Li, Donald P McManus

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Pulmonary vascular disease associated with parasitic infection--the role of schistosomiasis.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2011
    Review
  11. Article
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  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Magda K EllisMolecular Parasitology Laboratory, Australian Centre for International and Tropical Health and Nutrition, Queensland Institute of Medical Research and University of Queensland, Australia. Magda.Ellis@qimr.edu.au
Zhen Zhen Zhao
Hong-Gen Chen
Grant W Montgomery
Yue-Sheng Li
Donald P McManus
QIMR Berghofer Medical Research Institute · AUThe University of Queensland · AUJiangsu Institute of Parasitic Diseases · CNWorld Health Organization - Pakistan · PK

Funding

SNAIL VECTORS OF SCHISTOSOMA AND PARAGONIMUS--BIOGEOGRAPHY &GENETIC DIVERSITYP50AI039461 · NIAID · NATIONAL INSTITUTE OF PARASITIC DISEASES · PI FENG, ZHENG · 1996 to 2006
$4.2M
NIAID NIH HHS 1 P 50AI-39461Wellcome Trust 071657
6 · The paper itself

Abstract

Genetic studies of human susceptibility to Schistosoma (blood fluke) infections have previously identified a genetic locus determining infection intensity with the African species, Schistosoma mansoni, in the 5q31-33 region of the human genome that is known to contain the Th2 immune response cluster, including the genes encoding the IL-4, IL-5, and IL-13 cytokines. These cytokines are key players in inflammatory immune responses and have previously been implicated in human susceptibility to infection with the Asian species, S. japonicum. In a nested case control study, we genotyped 30 HapMap tagging single nucleotide polymorphisms (SNPs) across these three genes in 159 individuals identified as putatively susceptible to reinfection with S. japonicum and in 133 putatively resistant individuals. A third group comprising 113 individuals demonstrating symptomatic infection was also included. The results provided no significant association at a global level between reinfection predisposition and any of the individual SNPs or haplotype blocks. However, two tagging SNPs in IL-5 demonstrated globally significant association with susceptibility to symptomatic infection. They were in strong linkage disequilibrium with each other and were found to belong to the same haplotype block that also provided a significant association after permutation testing. This haplotype was located in the 3'-untranslated region of IL-5, suggesting that variants in this region of IL-5 may modulate the immune response in these individuals with symptomatic infection.

Indexed as

Polymorphism, Single Nucleotide3' Untranslated RegionsFemaleGenetic Predisposition to DiseaseHaplotypesHumansInterleukin-5Linkage DisequilibriumMaleSchistosomiasis japonica3' Untranslated RegionsInterleukin-5

Identifiers

PMID18056382
PMCPMC2757302
OpenAlexW1603152823

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.