Evidence map›Paper›PMID 18047672›Full record

ArticleBMC microbiology2007

Functional, genetic and bioinformatic characterization of a calcium/calmodulin kinase gene in Sporothrix schenckii.

Liz Valle-Aviles, Shirley Valentin-Berrios, Ricardo R Gonzalez-Mendez, Nuri Rodriguez-Del Valle

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

  1. Genetic Manipulation inJournal of fungi (Basel, Switzerland) · 2026
    Review
  2. Current Insights intoJournal of fungi (Basel, Switzerland) · 2025
    Article
  3. Extracutaneous sporotrichosis.Clinical microbiology reviews · 2025
    Review
  4. Current Progress inJournal of fungi (Basel, Switzerland) · 2023
    Review
  5. Review
  6. Article
  7. Virulence Factors ofJournal of fungi (Basel, Switzerland) · 2022
    Review
  8. Transcriptome Analysis of Dimorphic Fungus Sporothrix schenckii Exposed to Temperature Stress.International microbiology : the official journal of the Spanish Society for Microbiology · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Sporothrix schenckii and Sporotrichosis.Clinical microbiology reviews · 2011
    Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Liz Valle-AvilesDepartment of Microbiology and Medical Zoology, Medical Sciences Campus, University of Puerto Rico, PO Box 365067, San Juan, PR 00936-5067, USA. nrodriguez@rcm.upr.edu
Shirley Valentin-Berrios
Ricardo R Gonzalez-Mendez
Nuri Rodriguez-Del Valle
University of Puerto Rico, Medical Sciences Campus · PRSan Juan Bautista School of Medicine · PR

Funding

UPR--MEDICAL SCIENCES CAMPUS, MBRS PROGRAMS06GM008224 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI SILVA, WALTER I · 1989 to 2008
$28.0M
YEAST ER MOLECULAR CHAPERONE TRANSLOCATION: GENOME DATABANK HOMOLOGSP41RR006009 · NCRR · MELLON PITTS CORPORATION (MPC CORP) · PI KNOLL, ERIC · 1990 to 2011
$22.0M
Bioinformatics Programs at Minority InstitutionsT36GM008789 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI NICHOLAS, HUGH BLACKARD · 2001 to 2009
$5.3M
NCRR NIH HHS 2 P41 RR06009-16A1NCRR NIH HHS P41 RR006009NIGMS NIH HHS 3S06-GM-008224NIGMS NIH HHS S06 GM008224NIGMS NIH HHS T36 GM008789NIGMS NIH HHS T36GM008789-05
6 · The paper itself

Abstract

backgroundSporothrix schenckii is a pathogenic, dimorphic fungus, the etiological agent of sporotrichosis, a subcutaneous lymphatic mycosis. Dimorphism in S. schenckii responds to second messengers such as cAMP and calcium, suggesting the possible involvement of a calcium/calmodulin kinase in its regulation. In this study we describe a novel calcium/calmodulin-dependent protein kinase gene in S. schenckii, sscmk1, and the effects of inhibitors of calmodulin and calcium/calmodulin kinases on the yeast to mycelium transition and the yeast cell cycle.

resultsUsing the PCR homology approach a new member of the calcium/calmodulin kinase family, SSCMK1, was identified in this fungus. The cDNA sequence of sscmk1 revealed an open reading frame of 1,221 nucleotides encoding a 407 amino acid protein with a predicted molecular weight of 45.6 kDa. The genomic sequence of sscmk1 revealed the same ORF interrupted by five introns. Bioinformatic analyses of SSCMK1 showed that this protein had the distinctive features that characterize a calcium/calmodulin protein kinase: a serine/threonine protein kinase domain and a calmodulin-binding domain. When compared to homologues from seven species of filamentous fungi, SSCMK1 showed substantial similarities, except for a large and highly variable region that encompasses positions 330 - 380 of the multiple sequence alignment. Inhibition studies using calmodulin inhibitor W-7, and calcium/calmodulin kinase inhibitors, KN-62 and lavendustin C, were found to inhibit budding by cells induced to re-enter the yeast cell cycle and to favor the yeast to mycelium transition.

conclusionThis study constitutes the first evidence of the presence of a calcium/calmodulin kinase-encoding gene in S. schenckii and its possible involvement as an effector of dimorphism in this fungus. These results suggest that a calcium/calmodulin dependent signaling pathway could be involved in the regulation of dimorphism in this fungus. The results suggest that the calcium/calmodulin kinases of yeasts are evolutionarily distinct from those in filamentous fungi.

Indexed as

Amino Acid SequenceBase SequenceCalcium-Calmodulin-Dependent Protein KinasesCalmodulinCell CycleEnzyme InhibitorsGene Expression Regulation, FungalMolecular Sequence DataMyceliumPhylogenySequence AlignmentSequence Analysis, DNASequence Homology, Amino AcidSporothrixYeastsCalcium-Calmodulin-Dependent Protein KinasesCalmodulinEnzyme Inhibitors

Identifiers

PMID18047672
PMCPMC2242797
OpenAlexW2019647156

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.