Evidence map›Paper›PMID 18039799›Full record

ArticleJournal of clinical microbiology2008

Relationships of nontypeable Haemophilus influenzae strains to hemolytic and nonhemolytic Haemophilus haemolyticus strains.

Kirk W McCrea, Jingping Xie, Nathan LaCross, Mayurika Patel, Deepa Mukundan, Timothy F Murphy, Carl F Marrs, Janet R Gilsdorf

Abstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 111 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Non-typeableEuropean respiratory review : an official journal of the European Respiratory Society · 2022
    Review
  6. Article
  7. Article
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  9. Observational
  10. Discriminative Potential of the Vitek MSJournal of clinical microbiology · 2020
    Article
  11. Article
  12. Identification and Characterization of "Journal of clinical microbiology · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
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  19. Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kirk W McCreaDepartment of Epidemiology, University of Michigan School of Public Health Tower, 109 Observatory, Ann Arbor, MI 48109-2029, USA. sigmb@med.umich.edu
Jingping Xie
Nathan LaCross
Mayurika Patel
Deepa Mukundan
Timothy F Murphy
Carl F Marrs
Janet R Gilsdorf
University of Michigan–Ann Arbor · USUniversity at Buffalo, State University of New York · US

Funding

H. influenzae Genes Associated with Acute Otitis MediaR01DC005840 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GILSDORF, JANET R · 2002 to 2010
$3.6M
Segregation of H.i nfluenzae LPS genes in otitis mediaR03DC006585 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MCCREA, KIRK W · 2004 to 2006
$227k
NIDCD NIH HHS R01 DC005840NIDCD NIH HHS R01 DC05840NIDCD NIH HHS R03 DC006585NIDCD NIH HHS R03 DC006585-01
6 · The paper itself

Abstract

Haemophilus influenzae is both a human respiratory pathogen and pharyngeal commensal, while H. haemolyticus, the closest phylogenetic relative of H. influenzae, is arguably a strict pharyngeal commensal. A hemolytic phenotype has historically differentiated H. haemolyticus from H. influenzae, but the recent recognition of significant nonhemolytic H. haemolyticus colonization has decreased this trait's resolvability. Given this and the potential of recombination between the species, we examined the distribution of microbiologic and molecular traits between collections of H. influenzae and H. haemolyticus strains separated within a dendrogram obtained by multilocus sequence analysis (MLSA). All strains hybridizing with a probe to iga, a gene encoding an immunoglobulin A protease of H. influenzae, clustered apart from strains that did not hybridize with the probe. Other traits also segregated significantly along this division, suggesting a separation of the species. Of note, the LOS genes licA, lic2A, and lgtC of H. influenzae were approximately 2, 6, and 54 times, respectively, more prevalent in H. influenzae than in H. haemolyticus. In contrast to species separation, interspecies recombination was evidenced by the inability of single gene sequences to phylogenetically separate the species and by the "fuzzy" distribution of some species-specific traits across the species dividing line. Together, these data support the historically accurate and pragmatic division of these species while recognizing their potential for recombination. Future comparative genomic studies identifying common and distinctive genes could be useful in evaluating their role in the commensal or virulent growth, respectively, of H. influenzae.

Indexed as

AdultBacterial ProteinsChild, PreschoolCluster AnalysisDNA, BacterialEvolution, MolecularGenes, BacterialHaemophilusHaemophilus InfectionsHumansInfantMolecular Sequence DataNucleic Acid HybridizationRecombination, GeneticSequence Analysis, DNASerine EndopeptidasesBacterial ProteinsDNA, BacterialIgA-specific serine endopeptidaselic2A protein, Haemophilus influenzaeSerine Endopeptidases

Identifiers

PMID18039799
PMCPMC2238123
OpenAlexW2099109562

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.