ArticleNucleic acids research2008
CandidaDB: a multi-genome database for Candida species and related Saccharomycotina.
Article in Nucleic acids research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 30 citations in OpenAlex.
- EpiCandIn: An open online resource for epidemiology of Candida infections in India.The Indian journal of medical research · 2024Article
- Pathogen-specific structural features ofmBio · 2023Article
- Identification and functional characterization of Candida albicans mannose-ethanolamine phosphotransferase (Mcd4p).Current genetics · 2019Article
- Distinct roles of Candida albicans-specific genes in host-pathogen interactions.Eukaryotic cell · 2014Article
- Candida guilliermondii: biotechnological applications, perspectives for biological control, emerging clinical importance and recent advances in genetics.Current genetics · 2013Article
- Utilization of multiple "omics" studies in microbial pathogeny for microbiology insights.Asian Pacific journal of tropical biomedicine · 2013Review
- Article
- Approaches to Fungal Genome Annotation.Mycology · 2011Article
- The Candida albicans GAP gene family encodes permeases involved in general and specific amino acid uptake and sensing.Eukaryotic cell · 2011Article
- Proteome-wide evidence for enhanced positive Darwinian selection within intrinsically disordered regions in proteins.Genome biology · 2011Article
- Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser.BMC genomics · 2010Article
- An extensive circuitry for cell wall regulation in Candida albicans.PLoS pathogens · 2010Article
- Genome sequence of the recombinant protein production host Pichia pastoris.Nature biotechnology · 2009Article
- FUNYBASE: a FUNgal phYlogenomic dataBASE.BMC bioinformatics · 2008Article
- GenoList: an integrated environment for comparative analysis of microbial genomes.Nucleic acids research · 2008Article
- Characterization of themSphereArticle
Corrections and comments
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
CandidaDB (http://genodb.pasteur.fr/CandidaDB) was established in 2002 to provide the first genomic database for the human fungal pathogen Candida albicans. The availability of an increasing number of fully or partially completed genome sequences of related fungal species has opened the path for comparative genomics and prompted us to migrate CandidaDB into a multi-genome database. The new version of CandidaDB houses the latest versions of the genomes of C. albicans strains SC5314 and WO-1 along with six genome sequences from species closely related to C. albicans that all belong to the CTG clade of Saccharomycotina-Candida tropicalis, Candida (Clavispora) lusitaniae, Candida (Pichia) guillermondii, Lodderomyces elongisporus, Debaryomyces hansenii, Pichia stipitis-and the reference Saccharomyces cerevisiae genome. CandidaDB includes sequences coding for 54 170 proteins with annotations collected from other databases, enriched with illustrations of structural features and functional domains and data of comparative analyses. In order to take advantage of the integration of multiple genomes in a unique database, new tools using pre-calculated or user-defined comparisons have been implemented that allow rapid access to comparative analysis at the genomic scale.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.