Evidence map›Paper›PMID 18036150›Full record

ArticleJournal of neurochemistry2008

Cross-linking of sites involved with alcohol action between transmembrane segments 1 and 3 of the glycine receptor following activation.

Ingrid A Lobo, R Adron Harris, James R Trudell

Abstract read
In one paragraph

Article in Journal of neurochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Zinc-dependent modulation of α2- and α3-glycine receptor subunits by ethanol.Alcoholism, clinical and experimental research · 2013
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Allosteric modulation of glycine receptors.British journal of pharmacology · 2011
    Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Single-channel analysis of ethanol enhancement of glycine receptor function.The Journal of pharmacology and experimental therapeutics · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ingrid A LoboWaggoner Center for Alcohol and Addiction Research, Section of Neurobiology and Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas 78712-1065, USA.
R Adron Harris
James R Trudell
The University of Texas at Austin · USStanford University · US

Funding

SITES AND MECHANISMS OF INHALED ANESTHETIC ACTIONSP01GM047818 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SONNER, JAMES MICHAEL · 1994 to 2008
$11.0M
Neurochemical & Behavioral Correlates of ETOH EffectsT32AA007471 · NIAAA · UNIVERSITY OF TEXAS AUSTIN · PI Kimberly Nixon · 1987 to 2026
$9.2M
BRAIN MEMBRANES IN ALCOHOL AND BENZODIAZEPINE DEPENDENCER01AA006399 · NIAAA · UNIVERSITY OF TEXAS AUSTIN · PI HARRIS, ROBERT A · 1985 to 2018
$8.8M
Properties of Specific Alcohol Binding SitesR01AA013378 · NIAAA · STANFORD UNIVERSITY · PI TRUDELL, JAMES ROBERT · 2002 to 2009
$1.9M
BRAIN MEMBRANES IN ALCOHOL AND BENZODIAZEPINE DEPENDENCER37AA006399 · NIAAA · UNIVERSITY OF TEXAS AUSTIN · PI HARRIS, ROBERT ADRON · 1989 to 1998
–
NIAAA NIH HHS AA007471-20NIAAA NIH HHS AA013378NIAAA NIH HHS AA06399NIAAA NIH HHS R01 AA006399NIAAA NIH HHS R01 AA013378NIAAA NIH HHS R37 AA006399NIAAA NIH HHS T32 AA007471NIGMS NIH HHS GM47818NIGMS NIH HHS P01 GM047818
6 · The paper itself

Abstract

The glycine receptor is a member of the Cys-loop, ligand-gated ion channel family and is responsible for inhibition in the CNS. We examined the orientation of amino acids I229 in transmembrane 1 (TM1) and A288 in TM3, which are both critical for alcohol and volatile anesthetic action. We mutated these two amino acids to cysteines either singly or in double mutants and expressed the receptors in Xenopus laevis oocytes. We tested whether disulfide bonds could form between A288C in TM3 paired with M227C, Y228C, I229C, or S231C in TM1. Application of cross-linking (mercuric chloride) or oxidizing (iodine) agents had no significant effect on the glycine response of wild-type receptors or the single mutants. In contrast, the glycine response of the I229C/A288C double mutant was diminished after application of either mercuric chloride or iodine only in the presence of glycine, indicating that channel gating causes I229C and A288C to fluctuate to be within 6 A apart and form a disulfide bond. Molecular modeling was used to thread the glycine receptor sequence onto a nicotinic acetylcholine receptor template, further demonstrating that I229 and A288 are near-neighbors that can cross-link and providing evidence that these residues contribute to a single binding cavity.

Indexed as

AlcoholsAnimalsBinding SitesCross-Linking ReagentsCysteineDisulfidesDose-Response Relationship, DrugFemaleGlycineHumansModels, MolecularMutagenesisOocytesOxidation-ReductionProtein Structure, SecondaryProtein Structure, TertiaryAlcoholsCross-Linking ReagentsCysteineDisulfidesGlycineReceptors, Glycine

Identifiers

PMID18036150
PMCPMC2387068
OpenAlexW2135700970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.