Evidence map›Paper›PMID 18032651›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2007

Uncoupling proton activation of vanilloid receptor TRPV1.

Sujung Ryu, Beiying Liu, Jing Yao, Qiang Fu, Feng Qin

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 1 synthesis or guideline pooled it, 134 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. CaInternational journal of molecular sciences · 2022
    Review
  8. Article
  9. Review
  10. Article
  11. Heat-dependent opening of TRPV1 in the presence of capsaicin.Nature structural & molecular biology · 2021
    Article
  12. Article
  13. Properties and Differential Expression of HFrontiers in physiology · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. Structure determination of the human TRPV1 ankyrin-repeat domain under nonreducing conditions.Acta crystallographica. Section F, Structural biology communications · 2020
    Article
  18. Review
  19. Article
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sujung RyuDepartment of Physiology and Biophysical Sciences, State University of New York at Buffalo, Buffalo, New York 14214, USA.
Beiying Liu
Jing Yao
Qiang Fu
Feng Qin
University at Buffalo, State University of New York · US

Funding

ALGORITHMS FOR MOLECULAR KINETICSR01RR011114 · NCRR · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI QIN, FENG · 1996 to 2008
$3.5M
Mechanisms of Heat Activation and Multimodal Functions of VR1 Receptor ChannelsR01GM065994 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI QIN, FENG · 2002 to 2010
$2.4M
NCRR NIH HHS R01-RR11114NIGMS NIH HHS R01-GM65994
6 · The paper itself

Abstract

Multimodal gating is an essential feature of many TRP ion channels, enabling them to respond to complex cellular environments. TRPV1, a pain receptor involved in nociception at the peripheral nerve terminals, can be activated by a range of physical and chemical stimuli (e.g., capsaicin, proton, and heat) and further sensitized by proinflammatory substances. How a single receptor achieves this multiplicity of functionality is poorly understood at the molecular level. Here, we investigated the structural basis of proton activation of TRPV1. Chimeric channels between rTRPV1 and the low pH-insensitive homolog TRPV2 were constructed by systematically exchanging the extracellular domains and were characterized using whole-cell recording in transiently transfected HEK293 cells. Two discrete domains, one involving the pore helix and the other the S3-S4 linker, were found crucial for direct activation of the channel by low pH. Single residue mutations in either domain (T633A/V538L) abrogated the proton-evoked current while preserving the capsaicin and heat responses and their potentiation by mildly acidic pH. Both residues exert a gating effect through hydrophobic interactions. Our results unravel novel information on the structural basis of channel function, and support the existence of discrete domains for multimodal gating of the channel. In view of the resemblance of the pore of TRPV1 to KcsA, our findings also provide evidence on the pore helix as an active component in channel gating in addition to its role in ion permeation.

Indexed as

ProtonsAmino Acid SequenceAnimalsCell LineFemaleHumansIon Channel GatingMolecular Sequence DataRatsTRPV Cation ChannelsXenopus laevisProtonsTrpv1 protein, ratTRPV Cation Channels

Identifiers

PMID18032651
PMCPMC6673297
OpenAlexW2047169541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.