Evidence map›Paper›PMID 18029214›Full record

ArticleMolecular genetics and metabolism2008

Global metabolic effects of glycerol kinase overexpression in rat hepatoma cells.

Ganesh Sriram, Lola Rahib, Jian-Sen He, Allison E Campos, Lilly S Parr, James C Liao, Katrina M Dipple

Open access · greenAbstract read
In one paragraph

Article in Molecular genetics and metabolism, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ganesh SriramDepartment of Human Genetics, David Geffen School of Medicine at UCLA, University of California, Gonda 5506B, 695 Charles E. Young Dr. South, Los Angeles, CA 90095-7088, USA.
Lola Rahib
Jian-Sen He
Allison E Campos
Lilly S Parr
James C Liao
Katrina M Dipple
University of California, Los Angeles · US

Funding

Automated Chip-Based Metabolomic Analysis(RMI)R33DK070328 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIAO, JAMES C · 2005 to 2006
$2.0M
Glycerol Kinase Deficiency to Study Metabolic DiseasesR01GM067929 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DIPPLE, KATRINA M · 2003 to 2005
$873k
Molecular Mechanisms of Glycerol Kinase DeficiencyK08DK060055 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DIPPLE, KATRINA M · 2001 to 2005
$605k
NIDDK NIH HHS K08 DK060055NIDDK NIH HHS K08DK60055NIDDK NIH HHS R33 DK070328NIDDK NIH HHS R33DK076328NIGMS NIH HHS R01 GM067929NIGMS NIH HHS R01GM 67929
6 · The paper itself

Abstract

Glycerol kinase has several diverse activities in mammalian cells. Glycerol kinase deficiency is a complex, single-gene, inborn error of metabolism wherein no genotype-phenotype correlation has been established. Since glycerol kinase has been suggested to exhibit additional activities than glycerol phosphorylation, expression level perturbation in this enzyme may affect cellular physiology globally. To investigate this possibility, we conducted metabolic investigations of wild-type and two glycerol kinase-overexpressing H4IIE rat hepatoma cell lines constructed in this study. The glycerol kinase-overexpressing cell lines exhibited a significantly higher consumption of carbon sources per cell, suggesting excess carbon expenditure. Furthermore, we quantified intracellular metabolic fluxes by employing stable isotope 13C labeling with a mathematically designed substrate mixture, gas chromatography-mass spectrometry, and comprehensive isotopomer balancing. This flux analysis revealed that the pentose phosphate pathway flux in the glycerol kinase-overexpressing cell lines was 2-fold higher than that in the wild-type, in addition to subtler flux changes in other pathways of carbohydrate metabolism. Furthermore, the activity and transcript level of the lipogenic enzyme glucose-6-phosphate dehydrogenase, the rate-limiting enzyme of the pentose phosphate pathway, were also about 2-fold higher than that of the wild-type; these data corroborate the flux analysis results. This study shows that glycerol kinase affects carbon metabolism globally, possibly through its additional functions, and highlights glycerol kinase's multifaceted role in cellular physiology.

Indexed as

AnimalsCarbohydrate MetabolismCarbon IsotopesCell Line, TumorGene ExpressionGlucosephosphate DehydrogenaseGlycerol KinaseHumansLiver Neoplasms, ExperimentalModels, BiologicalPentose Phosphate PathwayRatsRecombinant ProteinsTransfectionCarbon IsotopesGlucosephosphate DehydrogenaseGlycerol KinaseRecombinant Proteins

Identifiers

PMID18029214
PMCPMC2702542
OpenAlexW1972421432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.