Evidence map›Paper›PMID 18026750›Full record

ArticleDevelopment genes and evolution2007

Lens gene expression analysis reveals downregulation of the anti-apoptotic chaperone alphaA-crystallin during cavefish eye degeneration.

Allen G Strickler, Mardi S Byerly, William R Jeffery

Abstract read
PubMed Publisher
In one paragraph

Article in Development genes and evolution, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 41 citations in OpenAlex.

  1. Novel mechanisms of chemosensory adaptation to the cave environment.bioRxiv : the preprint server for biology · 2026
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  9. Cavefish and the basis for eye loss.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
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  19. Lens fibre cell differentiation and organelle loss: many paths lead to clarity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Allen G StricklerDepartment of Biology, University of Maryland, College Park, MD 20742, USA.
Mardi S Byerly
William R Jeffery
University of Maryland, College Park · US

Funding

Regulation of Eye Growth and Development by the LensR01EY014619 · NEI · UNIV OF MARYLAND, COLLEGE PARK · PI JEFFERY, WILLIAM R · 2003 to 2012
$3.8M
NEI NIH HHS R01 EY014619NEI NIH HHS R01-EY014619
6 · The paper itself

Abstract

We have conducted a survey of the expression patterns of five genes encoding three different classes of major lens proteins during eye degeneration in the blind cavefish Astyanax mexicanus. This species consists of two forms, an eyed surface-dwelling form (surface fish) and a blind cave-dwelling (cavefish) form. Cavefish form an optic primordium with a lens vesicle and optic cup. In contrast to surface fish, however, the cavefish lens does not differentiate fiber cells and undergoes massive apoptosis. The genes encoding the lens intrinsic membrane proteins MIP and MP19 and the divergent betaB1- and gammaM2-crystallins are expressed during cavefish lens development, although their levels are reduced because of a smaller lens, and the spatial distribution of their transcripts is modified because of the lack of differentiated fiber cells. In contrast, the alphaA-crystallin gene, which encodes a heat shock protein-related chaperone with antiapoptotic activity, is substantially downregulated in the developing cavefish lens. The results suggest that suppression of alphaA-crystallin antiapoptotic activity may be involved in cavefish eye degeneration.

Indexed as

Gene Expression Regulation, Developmentalalpha-Crystallin A ChainAnimalsApoptosisCrystallinsDown-RegulationFishesgamma-CrystallinsGene Expression ProfilingIn Situ HybridizationLens, CrystallinePhylogenyRNA, Messengeralpha-Crystallin A ChainCrystallinsgamma-CrystallinsRNA, Messenger

Identifiers

PMID18026750
OpenAlexW2121521233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.