Evidence map›Paper›PMID 18025156›Full record

ArticleBlood2008

RNAi screening of the tyrosine kinome identifies therapeutic targets in acute myeloid leukemia.

Jeffrey W Tyner, Denise K Walters, Stephanie G Willis, Mary Luttropp, Jason Oost, Marc Loriaux, Heidi Erickson, Amie S Corbin, Thomas O'Hare, Michael C Heinrich and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
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  9. Article
  10. RNAi Screening of Leukemia Cells Using Electroporation.Methods in molecular biology (Clifton, N.J.) · 2016
    Article
  11. Article
  12. Article
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  14. Article
  15. Review
  16. PDGFRβ reverses EphB4 signaling in alveolar rhabdomyosarcoma.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  17. Article
  18. Discovery of siRNA lipid nanoparticles to transfect suspension leukemia cells and provide in vivo delivery capability.Molecular therapy : the journal of the American Society of Gene Therapy · 2014
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jeffrey W TynerDivision of Hematology and Medical Oncology, Oregon Health and Science University Cancer Institute, Portland, USA.
Denise K Walters
Stephanie G Willis
Mary Luttropp
Jason Oost
Marc Loriaux
Heidi Erickson
Amie S Corbin
Thomas O'Hare
Michael C Heinrich
Michael W Deininger
Brian J Druker
Oregon Health & Science University · USHoward Hughes Medical Institute · USPortland VA Medical Center · US

Funding

Oregon Clinical and Translational Research InstituteUL1TR000128 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI ELLISON, DAVID H · 2012 to 2015
$28.7M
Howard Hughes Medical InstituteNCATS NIH HHS UL1 TR000128
6 · The paper itself

Abstract

Despite vast improvements in our understanding of cancer genetics, a large percentage of cancer cases present without knowledge of the causative genetic events. Tyrosine kinases are frequently implicated in the pathogenesis of numerous types of cancer, but identification and validation of tyrosine kinase targets in cancer can be a time-consuming process. We report the establishment of an efficient, functional screening assay using RNAi technology to directly assess and compare the effect of individually targeting each member of the tyrosine kinase family. We demonstrate that siRNA screening can identify tyrosine kinase targets containing activating mutations in Janus kinase (JAK) 3 (A572V) in CMK cells and c-KIT (V560G) in HMC1.1 cells. In addition, this assay identifies targets that do not contain mutations, such as JAK1 and the focal adhesion kinases (FAK), that are crucial to the survival of the cancer cells. This technique, with additional development, might eventually offer the potential to match specific therapies with individual patients based on a functional assay.

Indexed as

Antibodies, MonoclonalAntineoplastic AgentsCell Line, TumorGene LibraryHumansJanus Kinase 1Janus Kinase 3K562 CellsLeukemia, Myeloid, AcuteProtein-Tyrosine KinasesRNA InterferenceRNA, Small InterferingAntibodies, MonoclonalAntineoplastic AgentsJAK1 protein, humanJAK3 protein, humanJanus Kinase 1Janus Kinase 3Protein-Tyrosine KinasesRNA, Small Interfering

Identifiers

PMID18025156
PMCPMC2234058
OpenAlexW2074188115

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.