Evidence map›Paper›PMID 18022369›Full record

ArticleCell2007

Structural basis for signal-sequence recognition by the translocase motor SecA as determined by NMR.

Ioannis Gelis, Alexandre M J J Bonvin, Dimitra Keramisanou, Marina Koukaki, Giorgos Gouridis, Spyridoula Karamanou, Anastassios Economou, Charalampos G Kalodimos

Abstract read
In one paragraph

Article in Cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 213 papers.

0numbers the graph read from it
0cells of the map it votes in
213citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

213 citing papers in PubMed.

  1. Article
  2. Article
  3. Biomolecules · 2026
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. CaNature cell biology · 2025
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. The Multifunctional Preprotein Binding Domain of SecA.Chembiochem : a European journal of chemical biology · 2024
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article

153 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ioannis GelisDepartment of Chemistry, Rutgers University, Newark, NJ 07102, USA.
Alexandre M J J Bonvin
Dimitra Keramisanou
Marina Koukaki
Giorgos Gouridis
Spyridoula Karamanou
Anastassios Economou
Charalampos G Kalodimos

Funding

Structural basis for the assembly of the Sec translocase machineryR01GM073854 · NIGMS · UNIVERSITY OF MINNESOTA · PI KALODIMOS, CHARALAMPOS · 2007 to 2016
$3.1M
NIGMS NIH HHS GM-73854NIGMS NIH HHS R01 GM073854
6 · The paper itself

Abstract

Recognition of signal sequences by cognate receptors controls the entry of virtually all proteins to export pathways. Despite its importance, this process remains poorly understood. Here, we present the solution structure of a signal peptide bound to SecA, the 204 kDa ATPase motor of the Sec translocase. Upon encounter, the signal peptide forms an alpha-helix that inserts into a flexible and elongated groove in SecA. The mode of binding is bimodal, with both hydrophobic and electrostatic interactions mediating recognition. The same groove is used by SecA to recognize a diverse set of signal sequences. Impairment of the signal-peptide binding to SecA results in significant translocation defects. The C-terminal tail of SecA occludes the groove and inhibits signal-peptide binding, but autoinhibition is relieved by the SecB chaperone. Finally, it is shown that SecA interconverts between two conformations in solution, suggesting a simple mechanism for polypeptide translocation.

Indexed as

Protein Sorting SignalsProtein Structure, SecondaryProtein Structure, TertiaryAdenosine TriphosphatasesAmino Acid SequenceBacterial ProteinsMembrane Transport ProteinsModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularNucleic Acid ConformationPeptidesProtein BindingSecA ProteinsSEC Translocation ChannelsSequence AlignmentAdenosine TriphosphatasesBacterial ProteinsMembrane Transport ProteinsPeptidesProtein Sorting SignalsSecA ProteinsSEC Translocation Channels

Identifiers

PMID18022369
PMCPMC2170882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.