Evidence map›Paper›PMID 18021946›Full record

ArticleArchives of biochemistry and biophysics2008

The presence of distal and proximal promoters for rat mitochondrial glycerol-3-phosphate acyltransferase.

Kawalpreet K Aneja, Prajna Guha, Rasheda Y Shilpi, Sanjoy Chakraborty, Laura M Schramm, Dipak Haldar

Abstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Transcriptional Regulation of Acyl-CoA:Glycerol-International journal of molecular sciences · 2019
    Review
  2. Article
  3. How lipid droplets "TAG" along: Glycerolipid synthetic enzymes and lipid storage.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2017
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kawalpreet K AnejaDepartment of Biological Sciences, St. John's University, 8000 Utopia Parkway, Queens, NY 11439, USA.
Prajna Guha
Rasheda Y Shilpi
Sanjoy Chakraborty
Laura M Schramm
Dipak Haldar

Funding

MITOCHONDRIAL GLYCEROPHOSPHATE ACYLTRANSFERASER15GM057643 · NIGMS · ST. JOHN'S UNIVERSITY · PI HALDAR, DIPAK · 1998 to 2001
$160k
NIGMS NIH HHS GM-57643NIGMS NIH HHS R15 GM057643
6 · The paper itself

Abstract

Sequence analysis using the Promoser program predicted two promoter-like regions for rat mtGPAT: a distal promoter approximately 30kb upstream and a proximal promoter near the first translational codon. Rat liver cells transfected with pGL3-basic vector containing the distal and proximal promoter resulted in 10.8- and 4.8-fold increase in the luciferase activity, respectively. Results of electromobility shift assay and chromatin immunoprecipitation suggested binding of transcription factors to the distal and proximal promoter regions. 5' RACE PCR showed two transcripts with different transcriptional start sites. When transfected rat liver cells were starved and refed, there was about 2.7-fold increase in the luciferase activity with cells transfected with the distal promoter while the proximal promoter showed no change. Thus, the two promoters could be functionally distinguished. Taken together, the results suggest that there are two promoters for rat mtGPAT gene and that the transcriptional regulation is mediated through the distal promoter.

Indexed as

AnimalsBase SequenceCells, CulturedGlycerol-3-Phosphate O-AcyltransferaseHepatocytesMitochondrial ProteinsMolecular Sequence DataPromoter Regions, GeneticRatsGlycerol-3-Phosphate O-AcyltransferaseMitochondrial Proteins

Identifiers

PMID18021946
PMCPMC2262852

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.