Evidence map›Paper›PMID 18005438›Full record

ArticleBMC developmental biology2007

Characterization, developmental expression and evolutionary features of the huntingtin gene in the amphioxus Branchiostoma floridae.

Simona Candiani, Mario Pestarino, Elena Cattaneo, Marzia Tartari

Open access · hybridAbstract readComparative Study
In one paragraph

Article in BMC developmental biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Molecular therapy. Nucleic acids · 2024
    Article
  2. Article
  3. Article
  4. In Silico Analysis of Huntingtin Homologs in Lower Eukaryotes.International journal of molecular sciences · 2021
    Article
  5. Article
  6. Polyglutamine domain flexibility mediates the proximity between flanking sequences in huntingtin.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Simona CandianiDepartment of Biology, University of Genoa, viale Benedetto XV 5, 16132, Genoa, Italy. candiani@unige.it
Mario Pestarino
Elena Cattaneo
Marzia Tartari
University of Genoa · ITUniversity of Milan · IT

Funding

Telethon GGP06250
6 · The paper itself

Abstract

backgroundHuntington's disease is an inherited neurodegenerative disorder that is caused by the expansion of an N-terminal polyQ stretch in the huntingtin protein. In order to investigate the hypothesis that huntingtin was already involved in development of the nervous system in the last common ancestor of chordates, we isolated and characterised the huntingtin homologue from the amphioxus Branchiostoma floridae. In the present paper the amphioxus general term must be referred to Branchiostoma floridae.

resultsIn this report, we show that the exon-intron organization of the amphioxus huntingtin gene is highly conserved with that of other vertebrates species. The AmphiHtt protein has two glutamine residues in the position of the typical vertebrate polyQ tract. Sequence conservation is greater along the entire length of the protein than in a previously identified Ciona huntingtin. The first three N-terminal HEAT repeats are highly conserved in vertebrates and amphioxus, although exon rearrangement has occurred in this region. AmphiHtt expression is detectable by in situ hybridization starting from the early neurula stage, where it is found in cells of the neural plate. At later stages, it is retained in the neural compartment but also it appears in limited and well-defined groups of non-neural cells. At subsequent larval stages, AmphiHtt expression is detected in the neural tube, with the strongest signal being present in the most anterior part.

conclusionThe cloning of amphioxus huntingtin allows to infer that the polyQ in huntingtin was already present 540 million years ago and provides a further element for the study of huntingtin function and its evolution along the deuterostome branch.

Indexed as

Evolution, MolecularGene Expression Regulation, DevelopmentalAnimalsChordata, NonvertebrateConserved SequenceDNA, ComplementaryHumansHuntingtin ProteinNerve Tissue ProteinsNuclear ProteinsPeptidesPolymerase Chain ReactionSequence Homology, Amino AcidDNA, ComplementaryHTT protein, humanHuntingtin ProteinNerve Tissue ProteinsNuclear ProteinsPeptidespolyglutamine

Identifiers

PMID18005438
PMCPMC2206037
OpenAlexW2062296636

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.