Evidence map›Paper›PMID 18003976›Full record

ArticleMolecular biology of the cell2008

Multiple pathways differentially regulate global oxidative stress responses in fission yeast.

Dongrong Chen, Caroline R M Wilkinson, Stephen Watt, Christopher J Penkett, W Mark Toone, Nic Jones, Jürg Bähler

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed.

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  10. bioRxiv : the preprint server for biology · 2024
    Article
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  18. Oxidative stress response pathways in fungi.Cellular and molecular life sciences : CMLS · 2022
    Review
  19. Article
  20. Review

52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dongrong ChenCancer Research UK Fission Yeast Functional Genomics Group, Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1HH, United Kingdom.
Caroline R M Wilkinson
Stephen Watt
Christopher J Penkett
W Mark Toone
Nic Jones
Jürg Bähler

Funding

Cancer Research UK 12485Cancer Research UK A6517Wellcome Trust 077118
6 · The paper itself

Abstract

Cellular protection against oxidative damage is relevant to ageing and numerous diseases. We analyzed the diversity of genome-wide gene expression programs and their regulation in response to various types and doses of oxidants in Schizosaccharomyces pombe. A small core gene set, regulated by the AP-1-like factor Pap1p and the two-component regulator Prr1p, was universally induced irrespective of oxidant and dose. Strong oxidative stresses led to a much larger transcriptional response. The mitogen-activated protein kinase (MAPK) Sty1p and the bZIP factor Atf1p were critical for the response to hydrogen peroxide. A newly identified zinc-finger protein, Hsr1p, is uniquely regulated by all three major regulatory systems (Sty1p-Atf1p, Pap1p, and Prr1p) and in turn globally supports gene expression in response to hydrogen peroxide. Although the overall transcriptional responses to hydrogen peroxide and t-butylhydroperoxide were similar, to our surprise, Sty1p and Atf1p were less critical for the response to the latter. Instead, another MAPK, Pmk1p, was involved in surviving this stress, although Pmk1p played only a minor role in regulating the transcriptional response. These data reveal a considerable plasticity and differential control of regulatory pathways in distinct oxidative stress conditions, providing both specificity and backup for protection from oxidative damage.

Indexed as

Gene Expression Regulation, FungalGenes, FungalHydrogen PeroxideMitogen-Activated Protein Kinase KinasesOxidantsOxidative StressSchizosaccharomycesSchizosaccharomyces pombe ProteinsSignal Transductiontert-ButylhydroperoxideVitamin K 3Hydrogen PeroxideMitogen-Activated Protein Kinase KinasesOxidantsSchizosaccharomyces pombe Proteinstert-ButylhydroperoxideVitamin K 3

Identifiers

PMID18003976
PMCPMC2174203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.