Evidence map›Paper›PMID 18003924›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Separate functions for nuclear and cytoplasmic cryptochrome 1 during photomorphogenesis of Arabidopsis seedlings.

Guosheng Wu, Edgar P Spalding

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 126 citations in OpenAlex.

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  14. Effect of the Enhanced Production of ChlorophyllInternational journal of molecular sciences · 2023
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  16. Functions of COP1/SPA E3 Ubiquitin Ligase Mediated by MpCRY in the LiverwortInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Guosheng WuDepartment of Botany, University of Wisconsin, 430 Lincoln Drive, Madison, WI 53706, USA.
Edgar P Spalding
University of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cryptochrome blue-light receptors mediate many aspects of plant photomorphogenesis, such as suppression of hypocotyl elongation and promotion of cotyledon expansion and root growth. The cryptochrome 1 (cry1) protein of Arabidopsis is present in the nucleus and cytoplasm of cells, but how the functions of one pool differ from the other is not known. Nuclear localization and nuclear export signals were genetically engineered into GFP-tagged cry1 molecules to manipulate cry1 subcellular localization in a cry1-null mutant background. The effectiveness of the engineering was confirmed by confocal microscopy. The ability of nuclear or cytoplasmic cry1 to rescue a variety of cry1 phenotypes was determined. Hypocotyl growth suppression by blue light was assessed by standard end-point analyses and over time with high resolution by a custom computer-vision technique. Both assays indicated that nuclear, rather than cytoplasmic, cry1 was the effective molecule in these growth inhibitions, as was the case for the mechanistically linked membrane depolarization, which occurs within several seconds of cry1 activation. Petiole elongation also was inhibited by nuclear, but not cytoplasmic, cry1. Conversely, primary root growth and cotyledon expansion in blue light were promoted by cytoplasmic cry1 and inhibited by nuclear cry1. Anthocyanin production in response to blue light was strongly stimulated by nuclear cry1 and, to a lesser extent, by cytoplasmic cry1. An important step toward elucidation of cry1 signaling pathways is the recognition that different subcellular pools of the photoreceptor have different functions.

Indexed as

AnthocyaninsArabidopsisArabidopsis ProteinsCell NucleusCryptochromesCytosolFlavoproteinsGene Expression Regulation, PlantGenes, ReporterLightPhenotypePlants, Genetically ModifiedSeedlingsAnthocyaninsArabidopsis ProteinsCRY1 protein, ArabidopsisCryptochromesFlavoproteins

Identifiers

PMID18003924
PMCPMC2141859
OpenAlexW2076291816

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.