Evidence map›Paper›PMID 18000982›Full record

ArticleAmerican journal of medical genetics. Part A2007

X-chromosome inactivation patterns in monozygotic twins and sib pairs discordant for nonsyndromic cleft lip and/or palate.

Jane W Kimani, Min Shi, Sandra Daack-Hirsch, Kaare Christensen, Danilo Moretti-Ferreira, Mary L Marazita, L Leigh Field, John W Canady, Jeffrey C Murray

Open access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Observational
  4. Article
  5. Article
  6. Article
  7. Exploring Subclinical Phenotypic Features in Twin Pairs Discordant for Cleft Lip and Palate.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2017
    Article
  8. Article
  9. Risk of oral clefts in twins.Epidemiology (Cambridge, Mass.) · 2011
    Article
  10. Article
  11. Skewed X inactivation and IVF-conceived infants.Reproductive biomedicine online · 2010
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 4 countries.

Jane W KimaniDepartment of Pediatrics, University of Iowa, Iowa City, Iowa, USA.
Min Shi
Sandra Daack-Hirsch
Kaare Christensen
Danilo Moretti-Ferreira
Mary L Marazita
L Leigh Field
John W Canady
Jeffrey C Murray
University of Iowa · USNational Institute of Environmental Health Sciences · USUniversidade Estadual Paulista (Unesp) · BRUniversity of British Columbia · CAUniversity of Pittsburgh · USUniversity of Southern Denmark · DK

Funding

Extending the Phenotype of Nonsyndromic Orofacial CleftsR01DE016148 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L., WEINBERG, SETH M · 2004 to 2018
$19.7M
PHENOTYPE AND GENETICS IN OROFACIAL CLEFT FAMILIESP50DE016215 · NIDCR · UNIVERSITY OF IOWA · PI FITZPATRICK, DAVID · 2004 to 2008
$10.1M
THERMAL ASSEMBLY OF MINERAL/COLLAGEN BIOMATERIALSP60DE013076 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 1999 to 2003
$8.4M
Molecular Genetic Epidemiology of Cleft Lip and PalateR37DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2004 to 2013
$6.8M
Cleft Lip Genetics: A Multi Center International ConsortiumR01DE014667 · NIDCR · UNIVERSITY OF IOWA · PI LIDRAL, ANDREW C · 2001 to 2009
$4.2M
GENE-ENVIRONMENT INTERACTION IN FACIAL CLEFTSR01DE011948 · NIDCR · UNIVERSITY OF SOUTHERN DENMARK · PI CHRISTENSEN, KAARE · 1998 to 2006
$1.8M
GENETIC MAPPING STUDIES OF ORAL-FACIAL CLEFTS IN CHINAR01DE009886 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI MARAZITA, MARY L · 1992 to 2002
$1.0M
Discordant MZ twins in craniofacial gene discoveryR01DE015197 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2003 to 2006
$820k
Cleft Lip Genetics: Multicenter International ConsortiumK02DE015291 · NIDCR · UNIVERSITY OF IOWA · PI LIDRAL, ANDREW C · 2003 to 2007
$514k
Planning International Orofacial Cleft Genetic StudiesR21DE016930 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L · 2006 to 2007
$293k
Intramural NIH HHS Z99 ES999999NIDCR NIH HHS K02 DE015291NIDCR NIH HHS P50 DE016215NIDCR NIH HHS P50-DE016215NIDCR NIH HHS P60 DE013076NIDCR NIH HHS R01 DE009886NIDCR NIH HHS R01 DE011948NIDCR NIH HHS R01-DE011948NIDCR NIH HHS R01 DE014667NIDCR NIH HHS R01-DE014667NIDCR NIH HHS R01 DE015197NIDCR NIH HHS R01-DE-015197NIDCR NIH HHS R01 DE016148NIDCR NIH HHS R01-DE016148NIDCR NIH HHS R01-DE-09886NIDCR NIH HHS R21 DE016930NIDCR NIH HHS R21-DE016930NIDCR NIH HHS R37 DE008559NIDCR NIH HHS R37-DE-08559
6 · The paper itself

Abstract

Nonsyndromic clefts of the lip and/or palate are common birth defects with a strong genetic component. Based on unequal gender ratios for clefting phenotypes, evidence for linkage to the X chromosome and the occurrence of several X-linked clefting syndromes, we investigated the role of skewed X chromosome inactivation (XCI) in orofacial clefts. Our samples consisted of female monozygotic (MZ) twins (n = 8) and sister pairs (n = 152) discordant for nonsyndromic clefting. We measured the XCI pattern in peripheral blood lymphocyte DNA using a methylation based androgen receptor gene assay. Skewing of XCI was defined as the deviation in inactivation pattern from a 50:50 ratio. Our analysis revealed no significant difference in the degree of skewing between twin pairs (P = 0.3). However, borderline significant differences were observed in the sister pairs (P = 0.02), with the cleft lip with cleft palate group showing the most significant result (P = 0.01). We did not find evidence for involvement of skewed XCI in the discordance for clefting in our sample of female MZ twins. However, results from the paired sister study suggest the potential contribution of skewed XCI to orofacial clefting, particularly cleft lip and palate.

Indexed as

Chromosomes, Human, XX Chromosome InactivationCleft LipCleft PalateDiseases in TwinsFemaleHumansModels, GeneticModels, StatisticalPhenotypeSequence Analysis, DNATwins, Monozygotic

Identifiers

PMID18000982
PMCPMC2741174
OpenAlexW2007057887

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.