Evidence map›Paper›PMID 17993563›Full record

ArticleApplied and environmental microbiology2008

Cloning and characterization of two Lactobacillus casei genes encoding a cystathionine lyase.

Stefan Irmler, Sylvie Raboud, Beata Beisert, Doris Rauhut, Hélène Berthoud

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Stefan IrmlerAgroscope Liebefeld-Posieux Research Station ALP, Schwarzenburgstrasse 161, Bern, Switzerland. stefan.irmler@alp.admin.ch
Sylvie Raboud
Beata Beisert
Doris Rauhut
Hélène Berthoud
Federal Office for Agriculture · CHHochschule Geisenheim University · DEAgroscope · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Volatile sulfur compounds are key flavor compounds in several cheese types. To better understand the metabolism of sulfur-containing amino acids, which certainly plays a key role in the release of volatile sulfur compounds, we searched the genome database of Lactobacillus casei ATCC 334 for genes encoding putative homologs of enzymes known to degrade cysteine, cystathionine, and methionine. The search revealed that L. casei possesses two genes that putatively encode a cystathionine beta-lyase (CBL; EC 4.4.1.8). The enzyme has been implicated in the degradation of not only cystathionine but also cysteine and methionine. Recombinant CBL proteins catalyzed the degradation of L-cystathionine, O-succinyl-L-homoserine, L-cysteine, L-serine, and L-methionine to form alpha-keto acid, hydrogen sulfide, or methanethiol. The two enzymes showed notable differences in substrate specificity and pH optimum.

Indexed as

Cloning, MolecularCystathionineCysteineEnzyme StabilityHomoserineHydrogen-Ion ConcentrationHydrogen SulfideKeto AcidsLacticaseibacillus caseiLyasesMethionineMolecular Sequence DataRecombinant ProteinsSerineSubstrate SpecificitySulfhydryl CompoundsCystathioninecystathionine beta-lyaseCysteineHomoserineHydrogen SulfideKeto AcidsLyasesMethioninemethylmercaptanO-succinylhomoserineRecombinant ProteinsSerineSulfhydryl Compounds

Identifiers

PMID17993563
PMCPMC2223195
OpenAlexW2144132095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.