Evidence map›Paper›PMID 17991809›Full record

ArticleBlood2008

An experimental system for the evaluation of retroviral vector design to diminish the risk for proto-oncogene activation.

Byoung Y Ryu, Marguerite V Evans-Galea, John T Gray, David M Bodine, Derek A Persons, Arthur W Nienhuis

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 76 citations in OpenAlex.

  1. Trial
  2. Ex Vivo Gene and Cell Therapy in Hematopoietic Stem Cells.International journal of molecular sciences · 2025
    Review
  3. Review
  4. Extracellular Vesicles and Their Use as Vehicles of Immunogens.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Charting a clear path: the ASGCT Standardized Pathways Conference.Molecular therapy : the journal of the American Society of Gene Therapy · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Byoung Y RyuDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN 38105, USA.
Marguerite V Evans-Galea
John T Gray
David M Bodine
Derek A Persons
Arthur W Nienhuis
St. Jude Children's Research Hospital · USNational Human Genome Research Institute · US

Funding

VIROSOME/PROTEOLIPOSOME MEDIATED GENE TRANSFERP01HL053749 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI WEISS, MITCHELL J · 1994 to 2022
$43.6M
Gene Therapy for Hemoglobin DisordersZ01HG200340 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BODINE, DAVID M. · 2007 to 2008
$1.1M
Gene Therapy for Hemoglobin DisordersZIAHG200340 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BODINE, DAVID M. · 2009 to 2010
$868k
NHLBI NIH HHS P01 HL053749NHLBI NIH HHS P01 HL53749
6 · The paper itself

Abstract

Pathogenic activation of the LMO2 proto-oncogene by an oncoretroviral vector insertion in a clinical trial for X-linked severe combined immunodeficiency (X-SCID) has prompted safety concerns. We used an adeno-associated virus vector to achieve targeted insertion of a gamma-retroviral long terminal repeat (LTR) driving a GFP expression cassette with flanking loxP sites in a human T-cell line at the precise location of vector integration in one of the patients with X-SCID. The LTR-GFP cassette was inserted into the first intron of the LMO2 gene, resulting in strong activation of LMO2. Cre-mediated cassette exchange was used to replace the original LTR-GFP cassette with one flanked by insulator elements leading to a several fold reduction in LMO2 expression. The LTR-GFP cassette was also replaced with a globin gene regulatory cassette that failed to activate the LMO2 gene in lymphoid cells. A gamma-retroviral vector with 2 intact LTRs resulted in activation of the LMO2 gene when inserted into the first intron, but a self-inactivating lentiviral vector with an internal cellular promoter and flanking insulator elements did not activate the LMO2 gene. Thus, this system is useful for comparing the safety profiles of vector cassettes with various regulatory elements for their potential for proto-oncogene activation.

Indexed as

Gene Expression RegulationGenetic VectorsProto-OncogenesAdaptor Proteins, Signal TransducingChromosomes, Human, XDNA-Binding ProteinsDNA, NeoplasmGenes, ReporterHumansIntronsJurkat CellsLIM Domain ProteinsMetalloproteinsPlasmidsProto-Oncogene MasProto-Oncogene ProteinsAdaptor Proteins, Signal TransducingDNA-Binding ProteinsDNA, NeoplasmLIM Domain ProteinsLMO2 protein, humanMAS1 protein, humanMetalloproteinsProto-Oncogene MasProto-Oncogene Proteins

Identifiers

PMID17991809
PMCPMC2234041
OpenAlexW2156338907

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.