Evidence map›Paper›PMID 17990091›Full record

ArticleVirus genes2008

Molecular characterisation of banana bunchy top virus (BBTV) from Pakistan.

Imran Amin, Javaria Qazi, Shahid Mansoor, Muhammad Ilyas, Rob W Briddon

Abstract read
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In one paragraph

Article in Virus genes, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 46 citations in OpenAlex.

  1. Detection andVirusdisease · 2023
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Molecular Characterization of Geographically Different Banana bunchy top virus Isolates in India.Indian journal of virology : an official organ of Indian Virological Society · 2010
    Article
  11. 98% identical, 100% wrong: per cent nucleotide identity can lead plant virus epidemiology astray.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2010
    Article
  12. Advances in Small Isometric Multicomponent ssDNA Viruses Infecting Plants.Indian journal of virology : an official organ of Indian Virological Society · 2010
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Imran AminPlant Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, PO Box 577, Faisalabad, Pakistan. imran@nibge.org
Javaria Qazi
Shahid Mansoor
Muhammad Ilyas
Rob W Briddon
National Institute for Biotechnology and Genetic Engineering · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Banana bunchy top disease is caused by a single-stranded circular DNA virus, banana bunchy top virus (BBTV), which is a member of the genus Babuvirus (family Nanoviridae). We have cloned and sequenced five components (DNA-R, DNA-S, DNA-N, DNA-M and DNA-C) of a BBTV isolate originating from Pakistan. In addition, the DNA-R and several other components of five further isolates, originating from geographically distinct sites across the banana-growing area of Sindh province, Pakistan, were cloned and sequenced. Analysis of the sequences indicates that BBTV present in Pakistan belongs to the "South Pacific" group of isolates and that the genetic diversity of the virus in the country is very low. The virus shows the highest levels of sequence identity to BBTV isolates originating from Egypt, India and Australia. The significance of these results with respect to the possible origin of the virus in Pakistan and the prospects for obtaining genetically engineered resistance to the virus are discussed.

Indexed as

Amino Acid SequenceBabuvirusBase SequenceCloning, MolecularDNA, ViralGenome, ViralMolecular Sequence DataMusaPakistanPhylogenyPlant DiseasesSequence AlignmentViral ProteinsDNA, ViralViral Proteins

Identifiers

PMID17990091
OpenAlexW2170634020

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.