Evidence map›Paper›PMID 17989708›Full record

ArticleGene therapy2008

The cHS4 chromatin insulator reduces gammaretroviral vector silencing by epigenetic modifications of integrated provirus.

C L Li, D W Emery

Abstract read
PubMed Publisher
In one paragraph

Article in Gene therapy, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Recent advances in gene therapy for thalassemia.Journal of pharmacy & bioallied sciences · 2012
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Genotoxicity of retroviral hematopoietic stem cell gene therapy.Expert opinion on biological therapy · 2011
    Review
  14. Article
  15. Controlled extracellular matrix degradation in breast cancer tumors improves therapy by trastuzumab.Molecular therapy : the journal of the American Society of Gene Therapy · 2011
    Article
  16. Article
  17. Article
  18. Article
  19. Assessing the risk of T-cell malignancies in mouse models of SCID-X1.Molecular therapy : the journal of the American Society of Gene Therapy · 2010
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

C L LiDivision of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA 98195-7720, USA.
D W Emery
University of Washington Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cHS4 chromatin insulator has been shown to improve the expression of integrating gene transfer vectors by reducing the impact of silencing chromosomal position effects. To better understand the underlying mechanisms of this protection, we investigated the influence of this element on the epigenetic modifications of a gammaretroviral reporter vector. In HT1080 cells, we found that a fourfold increase in the level of green fluorescent protein (GFP) reporter expression from the cHS4-insulated vector was correlated with a twofold increase in acetylation at lysines 9 and 14 of histone H3, but not with CpG methylation. In a mouse bone marrow transduction and transplantation model, we found that a 10-fold increase in the likelihood of GFP expression from the cHS4-insulated vector was correlated with an eightfold increase in histone H3 acetylation, as well as a fourfold decrease in CpG methylation. Histone hyperacetylation peaked at the cHS4 core, and in vivo diminished nearly threefold through the central portion of the vector. Taken together, these studies demonstrate that the cHS4 chromatin insulator reduces gammaretroviral vector silencing by modulating epigenetic modifications of integrated provirus, and identify a specific topological distribution of these modifications that may prove informative for future vector designs.

Indexed as

Insulator ElementsAnimalsBone Marrow CellsBone Marrow TransplantationCell LineChromatinDNA MethylationEpigenesis, GeneticGene SilencingGenes, ReporterGenetic VectorsGreen Fluorescent ProteinsMiceModels, AnimalProvirusesRetroviridaeChromatinGreen Fluorescent Proteins

Identifiers

PMID17989708
OpenAlexW2077107534

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.