Evidence map›Paper›PMID 17975083›Full record

ArticleMicrobiology (Reading, England)2007

Nickel enzyme maturation in Helicobacter hepaticus: roles of accessory proteins in hydrogenase and urease activities.

Stéphane L Benoit, Andrea L Zbell, Robert J Maier

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Maturation of the [Ni-4Fe-4S] active site of carbon monoxide dehydrogenases.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Interplay of metal ions and urease.Metallomics : integrated biometal science · 2009
    Review
  11. Sumner's legacy: a century of urease crystals and recent structural advances.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Stéphane L BenoitDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Andrea L ZbellDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Robert J MaierDepartment of Microbiology, University of Georgia, Athens, GA, USA.
University of Georgia · US

Funding

Nickel Metabolism in Helicobacter pyloriR01DK062852 · NIDDK · UNIVERSITY OF GEORGIA (UGA) · PI MAIER, ROBERT J. · 2004 to 2006
$763k
NIDDK NIH HHS R01 DK062852NIDDK NIH HHS R01DK062852
6 · The paper itself

Abstract

Helicobacter hepaticus, a causative agent of chronic hepatitis and hepatocellular carcinoma in mice, possesses a hydrogenase and a urease, both of which are nickel-containing enzymes. Analysis of the genome sequence of H. hepaticus revealed a full set of accessory genes which are required for the nickel maturation of each enzyme in other micro-organisms. Erythromycin-resistant mutants were constructed in four of these genes, hypA, hypB, ureE and ureG. Controls for polar effect were provided for hypA or hypB mutants by disrupting each gene located immediately downstream, i.e. hp0809 or hypC, respectively. Urease and hydrogenase activities were determined for each strain with or without supplemented nickel in the medium. As expected, the ureE and the ureG mutants had negligible urease activity, but they retained normal levels of hydrogenase activity. Urease levels could not be increased by the addition of nickel to the medium. The H. hepaticus hypA and hypB strains were deficient in both urease and hydrogenase activities, suggesting that both gene products act in a similar fashion as their counterparts in H. pylori. However, in contrast with the analogous mutants of H. pylori, the addition of nickel into the growth medium failed to restore either urease or hydrogenase enzyme levels in the H. hepaticus hypA or hypB mutants, indicating a probably unique role for these genes in the mouse liver pathogen.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceAnimalsBacterial ProteinsCarrier ProteinsGTP-Binding ProteinsHelicobacter hepaticusHydrogenaseImmunoblottingMiceMolecular Sequence DataMutagenesis, Site-DirectedMutationNickelUreaseBacterial ProteinsCarrier ProteinsGTP-Binding ProteinsHydrogenaseHypB protein, bacteriaNickelUrease

Identifiers

PMID17975083
PMCPMC2562792
OpenAlexW2171679313

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.