Evidence map›Paper›PMID 17972097›Full record

ArticleDevelopment genes and evolution2007

Structurally related Arabidopsis ANGUSTIFOLIA is functionally distinct from the transcriptional corepressor CtBP.

Mark D Stern, Hitoshi Aihara, Kiu-Hyung Cho, Gyung-Tae Kim, Gorou Horiguchi, Giorgio A Roccaro, Elizabeth Guevara, Huan Huan Sun, Dereje Negeri, Hirokazu Tsukaya and 1 more

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Article in Development genes and evolution, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  8. Article
  9. Leaf development.The arabidopsis book · 2013
    Article
  10. Evolution and diversity of the Golgi.Cold Spring Harbor perspectives in biology · 2011
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Mark D SternDepartment of Cell and Developmental Biology, Weill Medical College of Cornell University, 1300 York Avenue, Box 60, New York, NY 10021, USA.
Hitoshi Aihara
Kiu-Hyung Cho
Gyung-Tae Kim
Gorou Horiguchi
Giorgio A Roccaro
Elizabeth Guevara
Huan Huan Sun
Dereje Negeri
Hirokazu Tsukaya
Yutaka Nibu
Cornell University · USNational Institute for Basic Biology · JPMax Delbrück Center · DENational Institutes of Natural Sciences · JPTokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ANGUSTIFOLIA (AN) controls leaf morphology in the plant Arabidopsis thaliana. Previous studies on sequence similarity demonstrated that the closest proteins to AN are members of animal C-terminal-binding proteins (CtBPs) found in nematodes, arthropods, and vertebrates. Drosophila CtBP (dCtBP) functions as a transcriptional corepressor for deoxyribonucleic acid (DNA)-binding repressors containing the short amino acid motif, PXDLS, to regulate tissue specification and segmentation during early embryogenesis. It has previously been shown that AN was thought to repress transcription similar to the function of CtBPs; however, AN lacks some of the structural features that are conserved in animal CtBPs. In this paper, we examined whether AN is functionally related to dCtBP. Firstly, we re-examined sequence similarity among AN and various CtBPs from several representative species in the plant and animal kingdoms. Secondly, yeast two-hybrid assays demonstrated that AN failed to interact with an authentic CtBP-interacting factor, adenovirus E1A oncoprotein bearing the PXDLS motif. Thirdly, AN tethered to DNA was unable to repress the expression of reporter genes in transgenic Drosophila embryos. Fourthly, overexpression assays suggested that dCtBP and AN function differently in Drosophila tissues. Finally, AN failed to rescue the zygotic lethality caused by dCtBP loss-of-function. These data, taken together, suggest that AN is functionally distinct from dCtBP. Likely, ancestral CtBPs acquired corepressor function (capability of both repression and binding to repressors containing the PXDLS motif) after the animal-plant divergence but before the protostome-deuterostome split. We therefore propose to categorize AN as a subfamily member within the CtBP/BARS/RIBEYE/AN superfamily.

Indexed as

Structural Homology, ProteinAlcohol OxidoreductasesAmino Acid MotifsAmino Acid SequenceAnimalsArabidopsisArabidopsis ProteinsDNADNA-Binding ProteinsDrosophila melanogasterEmbryo, NonmammalianEvolution, MolecularGenetic Complementation TestMolecular Sequence DataPhenotypeProtein BindingAlcohol OxidoreductasesArabidopsis ProteinsC-terminal binding proteinDETORQEO protein, ArabidopsisDNADNA-Binding ProteinsRepressor Proteins

Identifiers

PMID17972097
OpenAlexW2102961872

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.